Bioconductor Uniprot

Showing : uniprot • reset

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4.4k

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ID Uniprot EntrezID

2.6 years ago tom.kloter • 0

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6.1k

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clusterProfiler AnnotationHub GO uniprot

updated 10 months ago by Guido Hooiveld ★ 4.1k • written 3.9 years ago by Alberto • 0

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1.2k

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UniProt.ws UniProt

updated 4.1 years ago by James W. MacDonald 67k • written 4.1 years ago by JavierM • 0

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1.2k

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Uniprot Annotation Identifiers

5.7 years ago Juliet Hannah ▴ 360

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1.0k

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drawProteins uniprot

updated 5.9 years ago by James W. MacDonald 67k • written 5.9 years ago by mblango • 0

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uniprot.ws uniprot uniprot accessions

updated 6.1 years ago by James W. MacDonald 67k • written 6.1 years ago by balin • 0

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1.3k

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biomart r getbm uniprot

6.8 years ago lluex.rova • 0

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1.4k

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uniprot.ws uniprot

updated 7.2 years ago by James W. MacDonald 67k • written 7.2 years ago by l.nilse • 0

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1.9k

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Annotation mouse UNIPROT

updated 7.3 years ago by Mike Smith ★ 6.6k • written 7.3 years ago by julie.chevalier • 0

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2.3k

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uniprot.ws UniProt annotation

8.1 years ago l.nilse • 0

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1.3k

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nimblegen Biomart Uniprot

updated 8.1 years ago by Gordon Smyth 52k • written 8.1 years ago by theobroma22 ▴ 10

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uniprot uniprot.ws

8.8 years ago Dario Strbenac ★ 1.5k

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3.2k

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uniprot.ws subcellular location uniprot

8.9 years ago DHS • 0

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uniprot.ws uniprot

updated 9.1 years ago by James W. MacDonald 67k • written 9.1 years ago by cerikahp • 0

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1.5k

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uniprot.ws uniprot uniprot accessions software error

updated 9.1 years ago by James W. MacDonald 67k • written 9.1 years ago by john ▴ 10

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4.2k

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biomart uniprot unimart

9.1 years ago john ▴ 10

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4.2k

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uniprot.ws uniprot

updated 9.8 years ago by Marc Carlson ★ 7.2k • written 9.8 years ago by Guido Hooiveld ★ 4.1k

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uniprot.ws uniprot ensembl

updated 9.9 years ago by Marc Carlson ★ 7.2k • written 9.9 years ago by Joseph Barry ▴ 160

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biomaRt uniprot ensembl

updated 10.0 years ago by me • 0 • written 10.0 years ago by António Miguel de Jesus Domingues ▴ 510

19 results • Page 1 of 1

Recent ...

Replies

Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k

limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k

Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…

Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60

Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k

For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0

Thanks for your reply!

Votes

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

A: Expected counts from RSEM in DESeq2

A: Using RSEM reads for DESeq2

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