Bioconductor Translation

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785

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event translation community

2.5 years ago kozo.nishida • 0

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975

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Translation Biostrings

3.4 years ago emmanuel.verde2939 • 0

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1.1k

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customprodb translation

updated 6.4 years ago by xiaojing.wang ▴ 50 • written 6.7 years ago by georges.bedran • 0

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point mutation aminoacid translation

updated 14 months ago by jtremblay514 • 0 • written 6.5 years ago by chandu.ncbs • 0

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6.4k

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translation

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by XIA.PAN ▴ 20

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6.5k

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convert translation

written 10.1 years ago by tomas.bjorklund ▴ 20

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1.2k

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translation pairwisealignment

8.4 years ago igferres • 0

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3.6k

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genomicranges genomicfeatures translation

updated 11 months ago by russ.bainer ▴ 10 • written 9.1 years ago by madsheilskov ▴ 10

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1.8k

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cancer translation ngs genomics Job

9.8 years ago jhjohnsn • 0

9 results • Page 1 of 1

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Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40

Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …

Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k

limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k

Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…

Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60

Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k

For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…

Votes

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

A: Expected counts from RSEM in DESeq2

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