Bioconductor Translation

Showing : translation • reset

votes

replies

769

views

event translation community

2.4 years ago kozo.nishida • 0

votes

replies

953

views

Translation Biostrings

3.3 years ago emmanuel.verde2939 • 0

votes

1.1k

views

customprodb translation

updated 6.3 years ago by xiaojing.wang ▴ 50 • written 6.6 years ago by georges.bedran • 0

votes

988

views

point mutation aminoacid translation

updated 13 months ago by jtremblay514 • 0 • written 6.4 years ago by chandu.ncbs • 0

vote

replies

6.3k

views

translation

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by XIA.PAN ▴ 20

votes

replies

6.5k

views

convert translation

written 10.0 years ago by tomas.bjorklund ▴ 20

votes

replies

1.1k

views

translation pairwisealignment

8.3 years ago igferres • 0

votes

replies

3.6k

views

genomicranges genomicfeatures translation

updated 10 months ago by russ.bainer ▴ 10 • written 9.0 years ago by madsheilskov ▴ 10

votes

replies

1.7k

views

cancer translation ngs genomics Job

9.7 years ago jhjohnsn • 0

9 results • Page 1 of 1

Recent ...

Replies

Comment: ANOVA like approach of edgeR by Yunshun Chen ▴ 870

If you do it this way, the dispersion estimates would be much higher than they should (as the cell type difference is not accounted for in …

Comment: ANOVA like approach of edgeR by SamGG ▴ 350

Simply remove the cell type from the model. design <- model.matrix(~targets$Status)

Answer: ANOVA like approach of edgeR by Yunshun Chen ▴ 870

You could try the followings: > design <- model.matrix(~ 0 + group) > contrast <- makeContrasts(PvsL = 0.5*(L.pregnant + B.pregnan…

Answer: Identical samples after deseq2 batch effect removal by maripane • 0

Thanks Michael, so is there a way to work around this issue? Can I somehow make sure I can remove this batch effects without overcorrecti…

Comment: CleanUpRNAseq with a GTF that is missing mitochondria annotation data by rcreed • 0

The updated version worked well on my data. Thank you!

Votes

A: ANOVA-like test with edgeR

Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data

A: TopGO: How to retrieve the gene list related to a GO ID ?

A: Error in DESeqDataSet : some values in assay are not integers

Awards • All