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News:
Bioconductor Course, Kenya 2025: Applications Open!
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Africa
Bioconductor
24 days ago
Maria Doyle
▴ 100
0
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844
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News:
RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
Bioconductor
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21 months ago
Maria Doyle
▴ 100
0
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0
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765
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News:
Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
Training
Bioconductor
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Community
Tutorial
22 months ago
Maria Doyle
▴ 100
1
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703
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Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training
Bioconductor
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22 months ago
Maria Doyle
▴ 100
2
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2.6k
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News:
BioCAsia, 5-6th December 2019, Sydney, Australia
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conference
News
5.7 years ago
Peter Hickey
▴ 750
8
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1.6k
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News:
BioCAsia, 29-30th November 2018, Melbourne, Australia
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conference
training
News
updated 6.2 years ago by
Gordon Smyth
52k • written 6.5 years ago by
Steve Pederson
▴ 170
2
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News:
LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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msstats
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7.1 years ago
mnchoi67
▴ 40
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News:
May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor
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msstats
proteomics
News
7.1 years ago
mnchoi67
▴ 40
3
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News:
Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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9.0 years ago
Martin Morgan
25k
1
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1.4k
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Help with neuroblastoma working group
Training
updated 9.5 years ago by
Vincent J. Carey, Jr.
6.7k • written 9.5 years ago by
paul.mineau
▴ 10
0
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1.8k
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Job:
Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
EMBL
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10.0 years ago
Wolfgang Huber
★ 13k
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News:
NGS data analysis training courses at EMBL-EBI
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10.1 years ago
gr231
▴ 10
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3
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2.1k
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Beginner's guide to DESeq2 pdf link broken
deseq2
training
updated 10.3 years ago by
Michael Love
43k • written 10.4 years ago by
sunshinne
• 0
1
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1.7k
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News:
Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
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10.4 years ago
Thomas Girke
★ 1.7k
14 results • Page
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Comment: DESeq2 It is correct to use interaction term for patient variability?
by
Bradley
• 0
I apologize, but I am still perplexed. I need to know the exact type of replication. Do we have many samples taken from the same tumor? You…
Comment: Differential variance analysis - can i use deseq2
by
Michael Love
43k
VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…
Answer: Use of limma R package with targeted proteomics for DE analysis
by
Gordon Smyth
52k
It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…
Comment: WGCNA
by
pammelala304
• 0
Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.
Comment: Does anyone have the command to download all of the core_nt using blast_db_get()
by
Matthew Thornton
▴ 380
Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…
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Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: normalizatino of dna methylation EPIC data
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
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