Bioconductor Systempiper

Showing : systempiper • reset

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1.3k

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systemPipeRdata systempipeR

2.9 years ago appropiate • 0

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668

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systemPipeRdata systemPipeR

2.9 years ago appropiate • 0

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1.1k

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systemPipeR

updated 3.1 years ago by dcassol ▴ 100 • written 3.1 years ago by Bioinformatics ▴ 30

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3.6k

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systemPipeR Bioconductor DiffBind BiocGenerics

updated 4.0 years ago by Martin Morgan 25k • written 4.0 years ago by tina • 0

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867

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predORF systemPipeR ORF prediction

5.8 years ago Mr.RB ▴ 20

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4.2k

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systempiper

6.2 years ago Deleted ▴ 70

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1.4k

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runCommandline systemPipeR bash

6.4 years ago rj.innet • 0

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1.4k

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systemPipeR rnaseq

6.4 years ago rj.innet • 0

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839

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systempiper

6.5 years ago kimberly.dickson • 0

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2.1k

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systempiper edger rna-seq

updated 6.8 years ago by Aaron Lun ★ 28k • written 6.8 years ago by clarisbaby • 0

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1.4k

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systempiper R batchjobs

updated 7.4 years ago by Thomas Girke ★ 1.7k • written 7.4 years ago by tarun2 • 0

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1.4k

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R edger systemPipeR

7.9 years ago xuertowong • 0

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2.4k

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R rnaseq tophat summarizeoverlaps systempiper

updated 8.2 years ago by Thomas Girke ★ 1.7k • written 8.2 years ago by abass.conteh • 0

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2.2k

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systempiper run_edgeR

updated 8.3 years ago by Thomas Girke ★ 1.7k • written 8.3 years ago by alexandr.gopanenko ▴ 50

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4.2k

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deseq2 systempiper Tutorial

8.6 years ago musa ▴ 10

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1.6k

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systempiper go term

8.7 years ago A Gossner ▴ 50

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1.9k

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systempiper seeFastqPlot software error ggplot2 geom_histogram

updated 9.0 years ago by Thomas Girke ★ 1.7k • written 9.0 years ago by setarosd • 0

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1.8k

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deseq2 systemPipeR

10.3 years ago Ugo Borello ▴ 340

18 results • Page 1 of 1

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Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Votes

Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

Awards • All

Teacher to Axel Klenk ★ 1.1k