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News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
release
Bioconductor
15 months ago
shepherl
4.1k
0
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0
replies
1.0k
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News:
New Package Submission Deadline for Bioc Release 3.14
newpackage
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3.6 years ago
shepherl
4.1k
0
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2
replies
1.2k
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Confusion error from automated checks for package submission
package
submiss
Submission
updated 4.0 years ago by
Hervé Pagès
16k • written 4.0 years ago by
sara.stankiewicz
• 0
1
vote
1
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1.2k
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Recommended logging/logger for bioconductor package submission.
Submission
updated 4.0 years ago by
Lluís Revilla Sancho
▴ 760 • written 4.0 years ago by
MatthaeusCaesar
• 0
0
votes
1
reply
1.3k
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News:
Bioconductor 3.13 New Package Submission Deadline
release
Submission
newpackage
Release
Deadline
4.0 years ago
shepherl
4.1k
1
vote
0
replies
1.3k
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
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News
4.6 years ago
shepherl
4.1k
0
votes
3
replies
1.5k
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News:
New Package Submission Workflow Updates!
new packages
submission
bioconductor
News
updated 3.8 years ago by
jonathan.dekermanjian
• 0 • written 4.8 years ago by
shepherl
4.1k
2
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2
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1.1k
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Does the 10 minute CMD check time limit include unit testing?
new package
submission
5.3 years ago
Krutik Patel
▴ 10
0
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0
replies
810
views
News:
Single Package Builder for New Package Submissions
new package
submission
release
News
5.4 years ago
shepherl
4.1k
1
vote
1
reply
930
views
Is ECIS Data within BioConductor's remit?
Submission
ECIS
Bioconductor Scope
updated 5.6 years ago by
Martin Morgan
25k • written 5.6 years ago by
jhuc964
▴ 10
0
votes
1
reply
1.5k
views
How to submit a package hosted on Bitbucket
package
submission
updated 8.6 years ago by
Martin Morgan
25k • written 8.6 years ago by
richierocks
▴ 40
1
vote
0
replies
4.4k
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News:
New Package Submission Process
submission
News
8.9 years ago
Dan Tenenbaum
★ 8.2k
7
votes
6
replies
2.4k
views
Help to find Volunteer who can review my bioconductor package before submission ?
r packages
submission
9.2 years ago
Jurat Shahidin
▴ 80
13
votes
1
reply
3.2k
views
News:
Updated Bioconductor Package Submission Policy
package
submission
News
9.3 years ago
Martin Morgan
25k
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Comment: CluserProfiler message "No gene can be mapped"
by
Carolina
• 0
There is, the overlap that reads out is ( Genes in common: 368 of 368 ). Here is the link for [background genes][1], [term2gene][2], [term2…
Comment: Differing results with DESeq2
by
JKim
• 0
My two cents. I think it would be more straightforward if you use cellmeans model. Have a look at [A guide to creating design matrices for …
Answer: CluserProfiler message "No gene can be mapped"
by
James W. MacDonald
68k
Your gene IDs are things like this: `Mpyr-NLJ1B.v3.hap1.scaffold1.g290550`, and the genes in your term2gene table are things like this: `Mp…
Answer: RNA-seq input to GRaNIE
by
James W. MacDonald
68k
This is [covered in the vignette.][1] [1]: https://bioconductor.org/packages/release/bioc/vignettes/GRaNIE/inst/doc/GRaNIE_packageDe…
Answer: Help using reduceSimMatrix with a custom annotation
by
sergisayolspuig
▴ 80
Hi there, `reduceSimMatrix()` expects a "GOALL" keytype in the OrgDb object when called with `children=TRUE` (which is the default for thi…
Votes
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
A: Unbalanced experiment with multiple samples from each patient.
A: Understanding contrasts limma
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