Bioconductor Subjunc

Showing : subjunc • reset

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1.1k

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subjunc data.frame myExons Rsubread

updated 20 months ago by ATpoint ★ 4.7k • written 20 months ago by Sukeerthi • 0

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2.8k

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subjunc edgeR

3.1 years ago Assa Yeroslaviz ★ 1.5k

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3.3k

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SubRead Align Subjunc

updated 4.7 years ago by James W. MacDonald 68k • written 4.7 years ago by abano • 0

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1.7k

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rsubread subjunc

updated 9.6 years ago by Wei Shi ★ 3.6k • written 9.6 years ago by Stephen Piccolo ▴ 600

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1.5k

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rsubread subjunc rnaseq fusion genes

updated 9.7 years ago by Wei Shi ★ 3.6k • written 9.7 years ago by misic • 0

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3.2k

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seqc rsubread featurecounts subjunc ercc News

10.3 years ago Wei Shi ★ 3.6k

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1.4k

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rnaseq subjunc indel

updated 10.3 years ago by Wei Shi ★ 3.6k • written 10.3 years ago by daniel.silvestre ▴ 100

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

Votes

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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