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data.frame
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934
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'Killed' error during RNAseq alignment
subjunc
data.frame
myExons
Rsubread
updated 16 months ago by
ATpoint
★ 4.5k • written 16 months ago by
Sukeerthi
• 0
0
votes
1
reply
753
views
?? Any R script for subtracting multiple controls from multiple patients in data.frame and assign 1 if output is less than 0
Rscript
data.frame
forloop
R
4.3 years ago
Ankit
▴ 20
1
vote
1
reply
1.5k
views
TCGA isoform expression quantification file - how to reshape data
data.frame
tcga
reshape data
updated 5.5 years ago by
Steve Lianoglou
★ 13k • written 5.5 years ago by
mario.zanfardino
▴ 160
0
votes
1
reply
847
views
Error in data.frame for limmaCtData function
software error
limma
data.frame
updated 6.1 years ago by
Gordon Smyth
51k • written 6.1 years ago by
azmir004
• 0
0
votes
1
reply
1.1k
views
Workflow Perraudeau F1000 - Bioconductor workflow for scRNA-seq
data.frame
read.table
updated 6.6 years ago by
davide risso
▴ 980 • written 6.6 years ago by
viviana.marin-esteban
• 0
0
votes
0
replies
1.1k
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.8 years ago
aokoro
• 0
3
votes
2
replies
1.8k
views
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub
roadmap project
rpkm
data.frame
8.1 years ago • updated 8.0 years ago
wcstcyx
▴ 30
0
votes
1
reply
1.3k
views
plotBed R data frame - last line plotted with line 1
sushi
plotBed
data.frame
8.5 years ago
waqasnayab
• 0
6
votes
3
replies
3.6k
views
How to transform cytometry data from CSV and not FCS file?
flowcore
transform
data.frame
updated 8.6 years ago by
Jiang, Mike
★ 1.3k • written 8.6 years ago by
Julia
▴ 20
3
votes
3
replies
1.7k
views
Sorting data frame derived from GRanges
granges
data.frame
sort
updated 9.0 years ago by
Michael Lawrence
★ 11k • written 9.0 years ago by
igor
▴ 50
2
votes
2
replies
975
views
Error when add `in` column into data.frame
data.frame
updated 9.1 years ago by
Ryan C. Thompson
★ 7.9k • written 9.1 years ago by
qiuworld.ou
• 0
2
votes
6
replies
1.9k
views
edgeR output error and data frame setting
EdgeR
data.frame
glmLRT
updated 9.2 years ago by
Gordon Smyth
51k • written 9.2 years ago by
amoltej
▴ 10
12 results • Page
1 of 1
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Comment: SingleR Label.Ont
by
Leslie
• 0
wqeo oqwe owqeoweqo weqooqwe owqe o qweoq we
Comment: Question about using LRT test for time course experiments with DESeq2
by
James W. MacDonald
67k
An LRT has nothing to do with any contrast, but instead is comparing the model fit with and without certain coefficients. So if you do ``…
Comment: Question about using LRT test for time course experiments with DESeq2
by
Denise
• 0
Hi, Unfortunately, I don't know anyone who could help me with this particular question. Would calling the results() function with a cont…
Comment: limma technical repeat correction
by
john
• 0
Hi @gordonsmyth, Thank you very much for the clarification, including the details about lmer() and for confirming that the original analysi…
Comment: Error: 'term_similarity_from_KEGG' not found in simplifyEnrichment package
by
James W. MacDonald
67k
And this is [documented in the NEWS file][1]. [1]: https://bioconductor.org/packages/release/bioc/news/simplifyEnrichment/NEWS
Votes
Comment: limma technical repeat correction
Comment: What is the correct use of removeBatchEffect's design parameter
Comment: Analysis of 2*4 factorial design
Answer: How does one test for interactions in EdgeR?
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