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sort R RNAseq character numeric

updated 4.4 years ago by Ram ▴ 220 • written 4.4 years ago by camillab. ▴ 10

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clusterProfiler sort

updated 7.6 years ago by sghoshucla • 0 • written 9.4 years ago by horcsct ▴ 10

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granges data.frame sort

updated 9.3 years ago by Michael Lawrence ★ 11k • written 9.3 years ago by igor ▴ 50

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granges genomicranges sort seqnames order

updated 9.8 years ago by yinghua ▴ 30 • written 10.2 years ago by enricoferrero ▴ 680

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grangeslist sort

updated 10.0 years ago by Hervé Pagès 16k • written 10.0 years ago by Johannes Rainer ★ 2.1k

5 results • Page 1 of 1

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Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Comment: build samplesheet and plot profile by yf • 0

![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a

Answer: I am having issues with bowtie2_build by James W. MacDonald 67k

Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…

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Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

A: Doubt about the "zero expression" genes or genes with no reads at all in the co

Answer: Unable to install nloptr

Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?

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