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shiny
•
reset
0
votes
0
replies
760
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
2.6 years ago
Wolfgang Huber
★ 13k
0
votes
1
reply
1.1k
views
Error in ChAMP GUI
ChAMP
shiny
ChAMPdata
updated 2.9 years ago by
anna.stanislawska
• 0 • written 3.0 years ago by
Mari
• 0
0
votes
0
replies
982
views
Export Results from BatchQC Shiny App
BatchQC
RNA-seq
R
Shiny
batch-effect
4.8 years ago
manninm
• 0
0
votes
1
reply
1.2k
views
AnnotationHub display() gives JavaScript Alert and DataTables warning
AnnotationHub
Shiny
Rstudio
updated 5.0 years ago by
shepherl
4.1k • written 5.0 years ago by
bwiley4
• 0
6
votes
0
replies
1.5k
views
News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.9 years ago
Aaron Lun
★ 28k
0
votes
7
replies
1.8k
views
Problems with DESeq2 'design' parameter using Shiny/rhandsontable
deseq2
shiny
design
rhandsontable
hot_to_r()
updated 6.0 years ago by
Michael Love
43k • written 6.0 years ago by
hinkel2
• 0
0
votes
1
reply
2.2k
views
DEBrowser shiny - Maximum upload size exceeded - error
DEBrowser
shiny
6.1 years ago
tomasfly
• 0
0
votes
3
replies
1.8k
views
browseGenome with Shiny
rtracklayer
browsegenome
shiny
updated 6.4 years ago by
Michael Lawrence
★ 11k • written 6.4 years ago by
vivek82
• 0
12
votes
3
replies
6.5k
views
Error while uploading Bioconductor packages - R Shiny
shiny
package
deploy
6.9 years ago
lloyd.izard
▴ 80
3
votes
3
replies
1.6k
views
Sharing SC3_interactive results
SC3
single-cell
shiny
updated 7.8 years ago by
Vladimir Kiselev
▴ 150 • written 7.8 years ago by
cfustero
▴ 20
0
votes
1
reply
1.9k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
8.3 years ago • updated 8.1 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.4k
views
R packages developed using shiny
shiny
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
bhakti.dwivedi
• 0
1
vote
1
reply
1.5k
views
reactive CellCODE heatmap
cellcode
shiny
heatmap
updated 8.8 years ago by
Andrzej Oleś
▴ 750 • written 8.8 years ago by
christopher.clarskon15
▴ 20
0
votes
1
reply
1.8k
views
shiny account on mac not deploying server
limmagui
shiny
8.9 years ago
christopher.clarskon15
▴ 20
7
votes
0
replies
4.1k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
9.0 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
2.0k
views
Shiny - error messages with validate
R
validate
shiny
9.4 years ago
alptaciroglu
▴ 50
1
vote
7
replies
3.1k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
10.3 years ago
pshannon
▴ 100
17 results • Page
1 of 1
Recent ...
Replies
Comment: Differential variance analysis - can i use deseq2
by
Michael Love
43k
VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…
Answer: Use of limma R package with targeted proteomics for DE analysis
by
Gordon Smyth
52k
It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…
Comment: WGCNA
by
pammelala304
• 0
Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.
Comment: Does anyone have the command to download all of the core_nt using blast_db_get()
by
Matthew Thornton
▴ 380
Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…
Comment: normalizatino of dna methylation EPIC data
by
user_bioinfo
• 0
yes actually that's why I did, and its all good! thank you for your response
Votes
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: normalizatino of dna methylation EPIC data
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
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to
Mark Dunning
★ 1.1k
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to
shepherl
4.1k
Popular Question
to
Hugo Varet
▴ 80
Popular Question
to
Fred Hutch (Recruiting)
▴ 40
Popular Question
to
Wolfgang Huber
★ 13k
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