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sequence
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0
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998
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Scoring DNA motifs by conservation
conservation
sequence
genomicalignments
6.5 years ago
martin.busch
• 0
4
votes
3
replies
2.0k
views
Extracting sequences from BSgenomeViews object
sequence
bsgenome
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
nicola.romano
▴ 10
0
votes
2
replies
2.6k
views
Biostrings: retrieve 3'UTR sequence with Transcript
R
Biostrings
sequence
updated 7.9 years ago by
Mike Smith
★ 6.6k • written 7.9 years ago by
aspenaure
• 0
2
votes
4
replies
1.7k
views
plotting proteases digestion points in a protein
biostrings
iranges
sequence
alignment
protein
updated 8.1 years ago by
Michael Lawrence
★ 11k • written 8.1 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.2k
views
Map siRNA-Sequence to Gene
sequence
annotationhub
biostrings
updated 9.6 years ago by
Hervé Pagès
16k • written 9.6 years ago by
antje.janosch
• 0
0
votes
1
reply
1.6k
views
ABI HRM data analysis
ABI
sequence
DNA
melting
curve
updated 9.7 years ago by
Hervé Pagès
16k • written 9.7 years ago by
Prasanth
▴ 20
3
votes
3
replies
1.9k
views
Reading large DNA alignments and keeping polymorphic sites
sequence
alignment
biostrings
updated 10.2 years ago by
Hervé Pagès
16k • written 10.2 years ago by
ben.ward
▴ 30
0
votes
2
replies
2.0k
views
How do I extract data from a .ab1 file ?
ab1
sequence
sangerseqR
updated 10.2 years ago by
aaron.l.statham
▴ 10 • written 10.2 years ago by
anuragm
• 0
8 results • Page
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Answer: how many significant figures are there in DESeq2 output
by
ATpoint
★ 4.7k
I strongly recommend to not concern yourself with these sorts of marginal problems because you're entering a realm in which you're entirely…
Comment: Problem using locateVariants() from the VariantAnnotation package
by
Marco
• 0
Ok, I think I found the problem. By looking at the `locateVariants()` source code, I was able to pinpoint that the problems is when trying …
Comment: Conumee for EPIC and EPICv2 copy number
by
Adam
• 0
As described on the [github](https://github.com/hovestadtlab/conumee2) the way to do this is using array_type = c("EPIC", "EPICv2") This i…
Comment: graper 1.22 Build is Broken
by
shepherl
4.1k
This is not an appropriate place to report this. this is for usage questions. maintainers are notified automatically when it is failing on …
Comment: graper 1.22 Build is Broken
by
shepherl
4.1k
This post does not fit the theme of this forum.
Votes
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
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