Bioconductor Segmentation

Showing : segmentation • reset

votes

replies

693

views

BAM Segmentation CINdex VCF Data

2.5 years ago raven1306 • 0

votes

1.0k

views

PureCN CNV CNA segmentation calculateTangentNormal

updated 5.1 years ago by markus.riester ▴ 130 • written 5.1 years ago by sruddy17 • 0

votes

replies

976

views

segmentation reference CNA TCGA

6.0 years ago jlarsen728 • 0

vote

replies

1.4k

views

classification segmentation cell types image analysis crimage

6.5 years ago Jenny.chien • 0

votes

replies

1.8k

views

TCGA Cancer dnacopy segmentation

updated 7.6 years ago by markus.riester ▴ 130 • written 7.6 years ago by Luisa672 • 0

vote

replies

1.6k

views

dnacopy segmentation CBS

updated 8.0 years ago by Venkat Seshan ▴ 30 • written 8.0 years ago by W. C. ▴ 10

votes

replies

1.4k

views

gcrma segmentation fault segfault

updated 8.8 years ago by James W. MacDonald 68k • written 8.8 years ago by kazi • 0

7 results • Page 1 of 1

Recent ...

Replies

Comment: accounting for vs. removing batch effects with DESeq2 in RNAseq analysis by Blair • 0

@[Sprunki][1] wrote: Please read the vignette and think about adhering to the author's best practice, which discusses batch impacts. [1…

Comment: error in ChAMP loading file by 81becky • 0

hi Giulia, it sounds like you're facing a frustating issue with your chAMP import. One common suggestion is to double-check your CSV fomat…

Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k

From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…

Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0

Thank you, I will try this and see.

Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0

Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…

Votes

Answer: Efficiently working with HDF5-backed SingleCellExperiments

Efficiently working with HDF5-backed SingleCellExperiments

A: Effect of lfcThreshold on p-value in DESeq2

Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet

What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?

Awards • All

Popular Question to Vincent J. Carey, Jr. 6.7k

Teacher to Gordon Smyth 52k

Scholar to James W. MacDonald 68k