Bioconductor Segmentation

Showing : segmentation • reset

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693

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BAM Segmentation CINdex VCF Data

2.5 years ago raven1306 • 0

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1.0k

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PureCN CNV CNA segmentation calculateTangentNormal

updated 5.1 years ago by markus.riester ▴ 130 • written 5.1 years ago by sruddy17 • 0

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975

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segmentation reference CNA TCGA

6.0 years ago jlarsen728 • 0

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classification segmentation cell types image analysis crimage

6.5 years ago Jenny.chien • 0

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1.8k

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TCGA Cancer dnacopy segmentation

updated 7.6 years ago by markus.riester ▴ 130 • written 7.6 years ago by Luisa672 • 0

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1.6k

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dnacopy segmentation CBS

updated 8.0 years ago by Venkat Seshan ▴ 30 • written 8.0 years ago by W. C. ▴ 10

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1.4k

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gcrma segmentation fault segfault

updated 8.8 years ago by James W. MacDonald 68k • written 8.8 years ago by kazi • 0

7 results • Page 1 of 1

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Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k

From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…

Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0

Thank you, I will try this and see.

Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0

Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…

Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0

how you did it pls explain

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

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A: Effect of lfcThreshold on p-value in DESeq2

Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet

What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =

Comment: Unused arguments error without used arguments in GSVA?

Awards • All

Teacher to Gordon Smyth 52k

Scholar to James W. MacDonald 68k