Bioconductor Ruvg

Showing : ruvg • reset

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1.7k

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deseq2 normalization RUVg edger

updated 5.2 years ago by Michael Love 42k • written 5.2 years ago by Yang WY • 0

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885

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RUVg RNAseq batch effect

5.7 years ago gtechbio ▴ 10

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2.5k

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ruvseq ruvg ruv

updated 7.8 years ago by davide risso ▴ 980 • written 7.9 years ago by weiwsmiling • 0

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8.1k

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RUVg ruvseq rnaseq

updated 8 months ago by Shaimaa Gamal • 0 • written 9.5 years ago by Pauly Lin ▴ 160

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1.8k

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ruvseq RUV ruvnormalize ruvg

8.4 years ago anthonycolombo60 • 0

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2.9k

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ruvseq edger ruvg removebatcheffect

updated 8.8 years ago by Aaron Lun ★ 28k • written 8.8 years ago by g.atla ▴ 10

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2.0k

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deseq2 ruvg

9.3 years ago jordan.ramilowski • 0

7 results • Page 1 of 1

Recent ...

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Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

Thank you. If I have questions about QC/normalization, do I ask them here or ask a new question?

Votes

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

Answer: Detecting genomic signatures of drug resistance breast cancer in transcriptom

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