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rrbs
•
reset
4
votes
5
replies
1.3k
views
edgeR for a mixture experiment
edgeR
model-selection
RRBS
mixture-experiment
3.8 years ago
ingerslev
• 0
0
votes
2
replies
1.1k
views
MethylCC for RRBS data of Cord Blood
MethylCC
RRBS
cord blood
4.6 years ago
weichen-cls
• 0
0
votes
0
replies
940
views
Does it make sense to use Biseq for DMPs/DMCs in addition to DMRs?
Biseq
Methylation
DMP
DMR
RRBS
4.6 years ago
i.s.castanho
• 0
0
votes
1
reply
791
views
BiSeq - betaResults output only contains chr1 and chr2
biseq
betaRegression
RRBS
Methylation
4.9 years ago
i.s.castanho
• 0
5
votes
14
replies
2.5k
views
Odd P-value distribution in edgeR on RRBS data
edgeR
rrbs
updated 6.1 years ago by
Gordon Smyth
52k • written 6.1 years ago by
ingerslev
• 0
0
votes
4
replies
2.8k
views
MethylKit read in issue
methykit
rrbs
updated 6.7 years ago by
Mike Smith
★ 6.6k • written 6.7 years ago by
bekah
▴ 40
0
votes
3
replies
1.8k
views
scalability of edgeR on RRBS methylation data
edgeR
methyation
RRBS
updated 7.1 years ago by
Gordon Smyth
52k • written 7.1 years ago by
osa.zuta
▴ 40
0
votes
1
reply
1.3k
views
BiSeq - modelling options betaRegression
biseq
RRBS
betaregression
7.9 years ago
l.eijssen
• 0
1
vote
4
replies
2.2k
views
Using SVA with RRBS data
sva
RRBS
updated 7.9 years ago by
Jeff Leek
▴ 650 • written 7.9 years ago by
mrodrigues.fernanda
▴ 10
0
votes
3
replies
2.0k
views
SVA package for RRBS - bisulfite methylation data
rrbs
batch effect
methylation
sva
updated 8.4 years ago by
dashbrook1
• 0 • written 9.6 years ago by
GFM
▴ 20
4
votes
2
replies
1.7k
views
Bounded Regression with Limma for RRBS?
limma
rrbs
bsseq
updated 8.7 years ago by
Aaron Lun
★ 28k • written 8.7 years ago by
nhejazi
• 0
0
votes
5
replies
2.3k
views
SAAP-BS data analysis (RRBS) - BiSeq use and Coverage Histogram
biseq
RRBS
SAAP-BS
coverage
9.8 years ago
maria.maqueda
• 0
12 results • Page
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Comment: Web accessibility of Bioconductor.org
by
Sean Davis
21k
Added issue to website github repo: https://github.com/Bioconductor/bioconductor.org/issues/304
Comment: Web accessibility of Bioconductor.org
by
Vincent J. Carey, Jr.
6.7k
I watched https://www.youtube.com/watch?v=npto50RJpDc and that shows some principles that are not followed in the markup for the tables at …
Comment: Web accessibility of Bioconductor.org
by
Vincent J. Carey, Jr.
6.7k
I second the thanks for this post. I just tried the screen reader with macOS and see that the handling of our package tables is poor. How…
Comment: Web accessibility of Bioconductor.org
by
Michael Love
43k
hello. Thanks for your post, I'll post this also to the biocwebsite channel on the Bioconductor community slack. https://community-bioc.sl…
Answer: KEGG GSEA using Clusterprofiler - ncbi-geneid missing?
by
Jessica
• 0
Nevermind. Just had to change to Uniprot IDs and it worked :)
Votes
Store Matrix in DataFrame Cell
A: how to extract Granges not overlapping with other ganges?
DESeq2 1.20.0 lfcshrink function
A: LIMMA on RT-PCR data
Answer: Efficiently working with HDF5-backed SingleCellExperiments
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