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ropls
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Difference in Predictive component of PLS and OPLS Model
Metabolomics
plotGrouper
Bioconductor
ropls
PLSDAbatch
5 months ago
devarti.mahakalkar
• 0
0
votes
1
reply
1.6k
views
How to make OPLS-DA variable importance plot
crlmm
ropls
Metabolomics
updated 17 months ago by
James W. MacDonald
67k • written 17 months ago by
Charlotte
• 0
0
votes
1
reply
823
views
What does it mean when the permI set to different values give the same result
Metabolomics
ropls
updated 23 months ago by
etienne.thevenot
▴ 40 • written 23 months ago by
ansari.maya022
• 0
0
votes
2
replies
921
views
Error received in ropls package
Metabolomics
ropls
updated 2.0 years ago by
etienne.thevenot
▴ 40 • written 2.0 years ago by
ansari.maya022
• 0
0
votes
1
reply
1.4k
views
Error with ropls when using oplsda: Error in svd(wwMN) : infinite or missing values in 'x'
ropls
2.4 years ago
g0079
• 0
1
vote
1
reply
3.3k
views
create S-plots with ropls package
s-plot
ropls
opls-da
rna-seq
updated 3.3 years ago by
Nathalie
▴ 10 • written 4.4 years ago by
andreia
▴ 10
0
votes
1
reply
1.9k
views
OPLS package with @subsetVi = numeric(0)
metabolomicsWorkbenchR
PLS
OPLS
Metabolomics
ropls
updated 3.4 years ago by
etienne.thevenot
▴ 40 • written 3.4 years ago by
Fernando
• 0
0
votes
0
replies
777
views
Orthogonal PLS Regression for multiple response?
ropls
4.3 years ago
guido.guberman
• 0
0
votes
1
reply
1.1k
views
ropls package: Recreating scores calculation from an OPLS-DA model
ropls
updated 4.4 years ago by
Kevin Blighe
★ 4.0k • written 4.4 years ago by
tor.demmers
• 0
0
votes
4
replies
1.2k
views
predict.opls() doesn't work when Y is a matrix
ropls
updated 6.5 years ago by
etienne.thevenot
▴ 40 • written 6.5 years ago by
scottericr
• 0
0
votes
4
replies
1.7k
views
HOW to define the "parLabVc" indices in ropls package.
R
ropls
updated 6.6 years ago by
etienne.thevenot
▴ 40 • written 6.6 years ago by
yuan.guo001
• 0
0
votes
4
replies
2.1k
views
Error in ROPLS with LPS-DA
ROPLS
LPS-DA
6.7 years ago
abigailrandall85
• 0
5
votes
1
reply
3.7k
views
Data arrangement for PLSDA using the ropls R-package
plsda
ropls
updated 7.2 years ago by
etienne.thevenot
▴ 40 • written 7.2 years ago by
michael.eisenring
▴ 10
0
votes
1
reply
5.6k
views
problem with ropls library (OPLS-DA)
ropls
updated 8.4 years ago by
etienne.thevenot
▴ 40 • written 8.4 years ago by
dominik.guggisberg
• 0
14 results • Page
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Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
by
Aaron Lun
★ 28k
You don't mention how your matrix data is being represented, but if it's a file-backed matrix (e.g., `HDF5Matrix` or one of its variants, b…
Comment: contrast matrix design for a continuous variable
by
dtzhu337
• 0
Thank you, Gordon. X is time splines for time point, and yes, it's needed. However, I was also thinking to incorporate time point with se…
Answer: contrast matrix design for a continuous variable
by
Gordon Smyth
52k
Yes, the design and contrasts are correct. Your analysis is also adjusted for covariates defined by X, which I assume is what you want to …
Comment: fail to use addPerROIQC in Rmd
by
liu.n
• 0
That's odd. So it can run successfully within markdown but would be failed when knitting?
Comment: fail to use addPerROIQC in Rmd
by
joseph.joonsang
• 0
> dim(spe) [1] 19962 425
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