Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
riboseqr
•
reset
0
votes
0
replies
980
views
package ‘riboSeqR’ is not available for this version of R
Bioconductor
riboSeqR
20 months ago
Javier
• 0
0
votes
0
replies
635
views
Reference span vs. width of read in riboseqR
riboSeqR
4.6 years ago
ni2239
• 0
0
votes
1
reply
646
views
riboSeqR readRibodata fail in IRanges
riboSeqR
5.3 years ago
Hui.Pan
• 0
0
votes
2
replies
1.1k
views
aroundPromoter function in RiboSeqR gives error
riboseqr
6.2 years ago
amir.mahboubi.79
• 0
2
votes
3
replies
1.3k
views
Problem in reading .bam files (aligned to transcriptome) with ribofileCR function
R
riboseqr
ribosome profiling
6.9 years ago
bsad
• 0
0
votes
3
replies
1.5k
views
Error in frameCounting using riboSeqR
riboseq
R
riboseqr
7.3 years ago
yingyingguo0228
• 0
1
vote
2
replies
1.8k
views
error in frameCounting in riboSeqR
riboseqr
ribosome profiling
updated 8.8 years ago by
Thomas J Hardcastle
▴ 180 • written 8.9 years ago by
alper.celik
• 0
0
votes
2
replies
1.7k
views
error in callingFrames : riboSeqR
R
riboseqr
ribosome profiling
9.2 years ago
ohtack9
• 0
1
vote
3
replies
1.4k
views
error in loading Riboseq
software error
riboseqr
9.2 years ago
yyu
• 0
1
vote
0
replies
1.8k
views
Job:
PhD Student in Computational Biology
differential gene expression
rnaseq
riboseqr
computational biology
Job
9.2 years ago
Bernd Fischer
▴ 550
0
votes
1
reply
1.2k
views
riboSeqR: legend in plotFS
riboseqr
updated 9.7 years ago by
Thomas J Hardcastle
▴ 180 • written 9.7 years ago by
antonvila.s
• 0
0
votes
0
replies
1.0k
views
legend in plotFS
riboseqr
9.7 years ago
antonvila.s
• 0
0
votes
1
reply
1.1k
views
riboSeqR: plotTranscript error
riboSeqR
updated 9.7 years ago by
Thomas J Hardcastle
▴ 180 • written 9.7 years ago by
antonvila.s
• 0
0
votes
0
replies
1.1k
views
riboSeqR: questions on plotTranscript function
riboseqr
9.8 years ago
antonvila.s
• 0
0
votes
1
reply
1.3k
views
riboSeqR: criteria used to determine reading frames
riboSeqR
updated 9.8 years ago by
Thomas J Hardcastle
▴ 180 • written 9.8 years ago by
antonvila.s
• 0
0
votes
1
reply
1.2k
views
riboSeqR: plotTranscript function not showing coverage
riboseqr
updated 9.8 years ago by
Thomas J Hardcastle
▴ 180 • written 9.8 years ago by
antonvila.s
• 0
0
votes
0
replies
1.4k
views
riboSeqR: interpret plots generated by plotTranscript function
riboSeqR
plotTranscript function
10.2 years ago
Laura.Fancello
• 0
1
vote
3
replies
1.8k
views
RiboSeqR package input file format
riboSeqR
updated 10.2 years ago by
Thomas J Hardcastle
▴ 180 • written 10.2 years ago by
Laura.Fancello
• 0
18 results • Page
1 of 1
Recent ...
Replies
Comment: Cross-validation with multiple control subgroups in limma
by
Ali Barry
▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma
by
Gordon Smyth
52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
by
Robert Castelo
★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS
by
Aidan
▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
by
Michael Love
43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Votes
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
Awards
• All
Popular Question
to
Ali Barry
▴ 40
Popular Question
to
gabriel.hoffman
▴ 170
Popular Question
to
Jenny Drnevich
★ 2.0k
Popular Question
to
martin.grigorov
▴ 10
Scholar
to
James W. MacDonald
67k
Locations
• All
WEHI, Melbourne, Australia,
51 minutes ago
The city by the bay,
1 hour ago
Germany,
3 hours ago
EMBL Heidelberg,
3 hours ago
UPF, Barcelona, Spain,
3 hours ago
Traffic: 643 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6