Bioconductor ResultsNames

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DESeq2 resultsNames lfcShrink

updated 2.7 years ago by ATpoint ★ 4.8k • written 2.7 years ago by eve.olszanowski • 0

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resultsNames DESeq2 coefficient

4.0 years ago Jane ▴ 10

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resultsNames DESeq2

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pairwise deseq2 extracting contrasts resultsnames results deseq2

updated 6.4 years ago by Michael Love 43k • written 6.4 years ago by Ricardo Rodrigues • 0

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deseq2 resultsnames batch effect contrast

updated 7.6 years ago by Michael Love 43k • written 7.6 years ago by pkachroo ▴ 10

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deseq2 DESeq2 resultsNames

7.8 years ago davichen ▴ 10

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deseq2 resultsnames

updated 7.8 years ago by Michael Love 43k • written 7.8 years ago by mrigaya.mehra ▴ 10

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deseq2 rnaseq resultsnames

8.0 years ago zeynep.nenseth • 0

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DESeq deseq2 resultsnames

8.8 years ago akaever ▴ 30

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deseq2 resultsnames multifactorial design

updated 8.9 years ago by Michael Love 43k • written 8.9 years ago by Ira ▴ 10

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deseq2 relevel resultsNames multifactorial design

updated 9.2 years ago by Michael Love 43k • written 9.2 years ago by rclaire ▴ 20

11 results • Page 1 of 1

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Comment: Intepretation of results by Tom • 0

[Locksmith Wombwell][1] I have been interested in using AUCell as a way to determine significantly enriched pathways in my single cell spat…

Comment: Gene Ontology (GO) Analysis by Tom • 0

[Locksmith near me][1] Hello, I'm learning about Gene Ontology analysis. I'm trying to understand the difference between the hyperGTest fun…

Comment: DiffBind; Error: No sites have activity greater than filter value by etiennedanis • 0

Same issue here as well. This is very weird because I never had this issue before. I started observing this issue with a new ATAC-seq da…

Comment: GSEA preranked analysis downstream of DEseq2 by Ajay • 0

`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/

Comment: error in ChAMP loading file by janwilseo • 0

Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)

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Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline

How to remove X & Y chromosome genes from RNAseq data

Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?

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