Bioconductor R package problem

Showing : r package problem • reset

votes

replies

1.6k

views

package installation compilation error r package problem shared libraries loading error

5.5 years ago Martin Maechler ▴ 330

votes

replies

2.0k

views

rbgl r package problem

updated 5.6 years ago by Martin Morgan 25k • written 5.6 years ago by ngs06 ▴ 20

vote

1.0k

views

package development r package problem build/check error mmappr2

5.7 years ago Kyle Johnsen ▴ 30

votes

replies

671

views

r package problem

updated 5.8 years ago by Mike Smith ★ 6.5k • written 5.8 years ago by hamedhm • 0

votes

replies

2.9k

views

r package problem

6.1 years ago rdpinho • 0

votes

replies

950

views

r package problem

7.0 years ago Mohamad S. Hasan • 0

votes

replies

1.8k

views

package installation r package problem

updated 7.7 years ago by Martin Morgan 25k • written 7.7 years ago by sumudu_rangika ▴ 20

votes

replies

4.6k

views

software error r package problem

updated 8.1 years ago by Martin Morgan 25k • written 8.1 years ago by kkp7700 • 0

votes

replies

980

views

R package problem

8.6 years ago zjzace • 0

9 results • Page 1 of 1

Recent ...

Replies

Answer: Behaviour of featureCounts when quantifying multi-mapping reads by Yang Liao ▴ 400

Both `v1.5.0` and `v1.6.4` versions are very old. I suggest upgrading to `v2.0.6` (the latest version). There was a change regarding the `…

Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr by Ozan • 0

Sounds good. Thanks again!

Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr by James W. MacDonald 66k

Ah, ok. Doesn't really matter though. Try using `UniProt.ws`.

Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr by Ozan • 0

I believe my `NCBI.sqlite` database is located in the same directory, but for some reason it seems to be empty. Even in the File explorer i…

Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr by James W. MacDonald 66k

You have to do that in the directory that contains your NCBI.sqlite database. ``` > library(RSQLite) > con <- dbConnect(SQLite(), "thisfil…

Votes

Answer: Behaviour of featureCounts when quantifying multi-mapping reads

Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr

Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`

Awards • All