Bioconductor Promoter

Showing : promoter • reset

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1.3k

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promoter GenomicRanges rtracklayer GRanges

3.3 years ago Arslan • 0

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1.5k

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promoter

updated 4.6 years ago by Hervé Pagès 16k • written 4.6 years ago by Charles Plessy ▴ 180

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1.5k

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r granges promoter

updated 5.8 years ago by Hervé Pagès 16k • written 5.8 years ago by eggrandio • 0

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1.1k

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TSS promoter cage cager

6.1 years ago bharata1803 ▴ 60

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1.5k

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genomicranges genomicfeatures promoter upstream_flank

6.2 years ago Wojeff • 0

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2.3k

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repitools promoter tss annotation

6.8 years ago Ryan C. Thompson ★ 7.9k

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2.2k

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TxDB genomicfeatures promoter getpromoterseq

updated 6.8 years ago by Hervé Pagès 16k • written 6.8 years ago by rbenel ▴ 40

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1.3k

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dexseq promoter utr

updated 8.5 years ago by Alejandro Reyes ★ 1.9k • written 8.5 years ago by joan.hooper • 0

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2.2k

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bsgenome txdb promoter

updated 8.9 years ago by Martin Morgan 25k • written 8.9 years ago by sekawaiwai2006 ▴ 20

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3.1k

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promoter granges refseq ucsc organismdb

updated 9.1 years ago by Robert Castelo ★ 3.4k • written 9.1 years ago by efoss ▴ 10

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1.5k

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VariantAnnotation promoter drosophila melanogaster

updated 10.0 years ago by Valerie Obenchain ★ 6.8k • written 10.0 years ago by lidia.mateo ▴ 30

11 results • Page 1 of 1

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Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by freemanmclaughlin9969289 • 0

Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…

Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0

Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…

Answer: EuroBioC2023 abstract submission closing soon! by excess.gecko.shso • 0

Don't miss out! EuroBioC2023 abstract submissions are nearing the deadline. Sharpen your scientific [Wordle Game][1] skills and submit your…

Answer: EuroBioC2024 abstract submission is open! by excess.gecko.shso • 0

EuroBioC2024 abstract submissions are now open! Join the Oxford conference from Sep 4-6. Submit your abstract by April 26 for short talks, …

Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40

Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …

Votes

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

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