Bioconductor Plotmds

Showing : plotmds • reset

vote

replies

1.4k

views

plotMDS limma

21 months ago • updated 20 months ago Cen • 0

vote

replies

4.5k

views

plotMDS limma

updated 22 months ago by Gordon Smyth 52k • written 22 months ago by liujy4 • 0

votes

replies

1.8k

views

plotMDS PCA RNASeq MDS

updated 3.1 years ago by Gordon Smyth 52k • written 3.1 years ago by Raito92 ▴ 60

votes

replies

1.7k

views

limma plotMDS

3.7 years ago jamie.gearing ▴ 60

votes

replies

5.0k

views

edgeR plotmds differential gene expression MDS mdsplot

updated 6.3 years ago by Gordon Smyth 52k • written 6.3 years ago by ilovesuperheroes1993 • 0

votes

945

views

plotMDS Cell lines limma

updated 6.6 years ago by Gordon Smyth 52k • written 6.6 years ago by Alexander Azarian ▴ 30

votes

replies

1.2k

views

tree bootstrap dgelist plotmds

7.1 years ago Larry K. • 0

votes

replies

6.9k

views

limma edger plotmds tmm masigpro

7.4 years ago dacaba.92 ▴ 10

votes

replies

2.0k

views

edger plotmds

7.6 years ago fawazfebin ▴ 60

votes

2.3k

views

edger plotmds

updated 7.6 years ago by Aaron Lun ★ 28k • written 7.6 years ago by mictadlo ▴ 10

vote

1.9k

views

affymetrix microarrays sva combat sva batch effect plotMDS

updated 8.7 years ago by Jeff Leek ▴ 650 • written 8.7 years ago by svlachavas ▴ 840

votes

replies

1.3k

views

rgl plot3d plotmds

9.0 years ago Adam • 0

12 results • Page 1 of 1

Recent ...

Replies

Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

Awards • All