Bioconductor PlotMDS

Showing : plotMDS • reset

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1.4k

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plotMDS limma

19 months ago Cen • 0

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4.1k

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plotMDS limma

updated 21 months ago by Gordon Smyth 52k • written 21 months ago by liujy4 • 0

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1.7k

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plotMDS PCA RNASeq MDS

updated 3.0 years ago by Gordon Smyth 52k • written 3.0 years ago by Raito92 ▴ 60

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1.6k

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limma plotMDS

3.6 years ago jamie.gearing ▴ 60

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4.9k

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edgeR plotmds differential gene expression MDS mdsplot

updated 6.2 years ago by Gordon Smyth 52k • written 6.2 years ago by ilovesuperheroes1993 • 0

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924

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plotMDS Cell lines limma

updated 6.5 years ago by Gordon Smyth 52k • written 6.5 years ago by Alexander Azarian ▴ 30

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1.1k

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tree bootstrap dgelist plotmds

7.0 years ago Larry K. • 0

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6.8k

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limma edger plotmds tmm masigpro

7.2 years ago dacaba.92 ▴ 10

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1.9k

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edger plotmds

7.5 years ago fawazfebin ▴ 60

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2.3k

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edger plotmds

updated 7.5 years ago by Aaron Lun ★ 28k • written 7.5 years ago by mictadlo ▴ 10

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1.9k

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affymetrix microarrays sva combat sva batch effect plotMDS

updated 8.5 years ago by Jeff Leek ▴ 650 • written 8.5 years ago by svlachavas ▴ 840

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1.3k

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rgl plot3d plotmds

8.9 years ago Adam • 0

12 results • Page 1 of 1

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

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Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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