Bioconductor PlotMDS

Showing : plotMDS • reset

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1.4k

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plotMDS limma

20 months ago Cen • 0

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4.3k

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plotMDS limma

updated 22 months ago by Gordon Smyth 52k • written 22 months ago by liujy4 • 0

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1.8k

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plotMDS PCA RNASeq MDS

updated 3.1 years ago by Gordon Smyth 52k • written 3.1 years ago by Raito92 ▴ 60

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1.6k

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limma plotMDS

3.7 years ago jamie.gearing ▴ 60

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5.0k

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edgeR plotmds differential gene expression MDS mdsplot

updated 6.3 years ago by Gordon Smyth 52k • written 6.3 years ago by ilovesuperheroes1993 • 0

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938

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plotMDS Cell lines limma

updated 6.6 years ago by Gordon Smyth 52k • written 6.6 years ago by Alexander Azarian ▴ 30

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1.2k

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tree bootstrap dgelist plotmds

7.1 years ago Larry K. • 0

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6.9k

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limma edger plotmds tmm masigpro

7.3 years ago dacaba.92 ▴ 10

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2.0k

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edger plotmds

7.6 years ago fawazfebin ▴ 60

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2.3k

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edger plotmds

updated 7.6 years ago by Aaron Lun ★ 28k • written 7.6 years ago by mictadlo ▴ 10

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1.9k

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affymetrix microarrays sva combat sva batch effect plotMDS

updated 8.6 years ago by Jeff Leek ▴ 650 • written 8.6 years ago by svlachavas ▴ 840

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1.3k

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rgl plot3d plotmds

9.0 years ago Adam • 0

12 results • Page 1 of 1

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Answer: Version conflict when pushing to scQTLtools devel branch by shepherl 4.1k

There is a Bioconductor release today. There were notifications on the bioc-devel mailing list https://stat.ethz.ch/pipermail/bioc-devel…

Comment: DiffBind can't find a DAR by Mengjun • 0

The details about this question: I have 4 samples with 2 conditions( ctrl_1, ctrl_2, ko_1, ko_2), i use these 4 samples as input. Here is …

Comment: DiffBind can't find a DAR by Mengjun • 0

Thank you very much for pointing out this shortcoming. I will improve it.

Comment: samtools loading in R by Charlie • 0

This is obviously a very late answer but I had a similar error: > sh: samtools: command not found > > sh: samtools: command not found > …

Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label by njmcdirect • 0

https://www.www-njmcdirect.run/

Votes

DiffBind - question on the use of filtered or unfiltered input data

Answer: Enhanced Volcano Error when drawing connectors

Answer: Origin of the labels for the SingleCellMultiModal dataset

Answer: PhD scholar

Answer: how to use `arrayWeightsQuick()`?

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Popular Question to Dario Strbenac ★ 1.6k