Bioconductor Pairwisealignment

Showing : pairwisealignment • reset

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SAM samtools pairwisealignment alignment blastn

6.6 years ago ktehmsen • 0

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biostrings pairwisealignment

updated 7.2 years ago by Hervé Pagès 16k • written 7.2 years ago by kgorczak ▴ 10

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biostrings alignment pairwisealignment

updated 7.3 years ago by Hervé Pagès 16k • written 7.3 years ago by dhwani2410 • 0

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pairwisealignment SNP dnasequence

8.1 years ago lordbleys • 0

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translation pairwisealignment

8.6 years ago igferres • 0

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1.1k

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pairwisealignment indel

updated 8.7 years ago by Hervé Pagès 16k • written 8.7 years ago by oliwindram ▴ 10

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1.7k

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biostrings pairwisealignment

updated 8.9 years ago by Hervé Pagès 16k • written 8.9 years ago by Steve Lianoglou ★ 13k

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1.3k

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biostrings pairwisealignment

updated 8.9 years ago by shepherl 4.1k • written 8.9 years ago by jdydu • 0

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biostrings pairwisealignment

updated 9.5 years ago by Hervé Pagès 16k • written 9.5 years ago by boris.steipe • 0

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pairwisealignment biostrings

9.5 years ago vincent.plagnol ▴ 10

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1.9k

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biostrings pairwisealignment

9.5 years ago vincent.plagnol ▴ 10

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3.2k

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Biostrings pairwiseAlignment

updated 10.4 years ago by Hervé Pagès 16k • written 10.4 years ago by branislav misovic ▴ 120

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Comment: Issue with Soft-Thresholding in WGCNA by dirty.cougar.risi • 0

Interesting data! Looking at these genes, it's like navigating a complex maze. The fluctuating values remind me of chasing high scores in […

Answer: compute_fasta_digest does not match Salmon index hash by Michael Love 43k

Can you provide more details on when this is happening? The salmon index is the definitive hash associated with the quant files, so I'm con…

Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species by James W. MacDonald 68k

Oh wait. You want to map from Ensembl to NCBI? That's hard to do with model organisms, let alone non-model. This `OrgDb` doesn't have Ensem…

Answer: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species by James W. MacDonald 68k

You can use the `AnnotationHub` ``` > library(AnnotationHub) > hub <- AnnotationHub() |===========================| 100% sna…

Answer: List of Deprecated Packages for Bioc3.20 by shepherl 4.1k

HTqPCR has been fixed and will be re-instated in 3.21

Votes

what the test method for enrichGO in clusterProfiler?

A: single-cells RNA-seq analysis by MAST with unbalanced group size

Comment: plyranges: find exact GRanges match keeping metadata columns

Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran

Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?

Awards • All

Scholar to Michael Love 43k