Bioconductor Pairwisealignment

Showing : pairwisealignment • reset

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SAM samtools pairwisealignment alignment blastn

6.4 years ago ktehmsen • 0

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biostrings pairwisealignment

updated 7.0 years ago by Hervé Pagès 16k • written 7.0 years ago by kgorczak ▴ 10

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biostrings alignment pairwisealignment

updated 7.1 years ago by Hervé Pagès 16k • written 7.1 years ago by dhwani2410 • 0

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pairwisealignment SNP dnasequence

7.9 years ago lordbleys • 0

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translation pairwisealignment

8.4 years ago igferres • 0

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pairwisealignment indel

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by oliwindram ▴ 10

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biostrings pairwisealignment

updated 8.7 years ago by Hervé Pagès 16k • written 8.7 years ago by Steve Lianoglou ★ 13k

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biostrings pairwisealignment

updated 8.7 years ago by shepherl 4.1k • written 8.7 years ago by jdydu • 0

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biostrings pairwisealignment

updated 9.3 years ago by Hervé Pagès 16k • written 9.3 years ago by boris.steipe • 0

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pairwisealignment biostrings

9.3 years ago vincent.plagnol ▴ 10

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biostrings pairwisealignment

9.3 years ago vincent.plagnol ▴ 10

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3.1k

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Biostrings pairwiseAlignment

updated 10.2 years ago by Hervé Pagès 16k • written 10.2 years ago by branislav misovic ▴ 120

12 results • Page 1 of 1

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Answer: Error compiling Rbowtie2 in R-4.4 (Bioconductor 3.20 and probably 3.19) by ja.garcia • 0

It has been fixed by the Rbowtie2 maintainers in version 2.12.2. Thank you for the quick fix!

Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by Amora • 0

You did a great job giving an overview.....[slope][1] better than the bioconductor group! [1]: https://slopeio.org

Comment: contrast matrix design for a continuous variable by dtzhu337 • 0

Hi Gordon, Thank you very much for your answer. Actually the variable X is the age, which I am also interested in. Somehow, age and V1 are…

Answer: SingleCellExperiment convenience function for metadata+expression? by Peter Hickey ▴ 750

Hi Sarah, `scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…

Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by QN ▴ 10

Thank you ATpoint for your response! In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…

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Answer: SingleCellExperiment convenience function for metadata+expression?

How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.

Answer: EdgeR Biological CVs

Answer: Error in download.file for TCGAutils::symbolsToRanges

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