Showing : oligoclasses • reset
0
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3
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2.0k
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Error in library(oligo) : package or namespace load failed for ‘oligoClasses’
R oligoClasses Oligoclass Bioconductor Oligo
written 3.8 years ago by • 0
2
votes
8
replies
1.5k
views
pdInfoBuilder created problematic package for Affymetrix chip tiling array
oligoClasses oligo pdInfoBuilder
3.5 years ago • updated 3.4 years ago efoss ▴ 10
2
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6
replies
4.2k
views
Can't install package oligoClasses
R oligoClasses ff
updated 4.3 years ago by ★ 4.0k • written 4.3 years ago by ▴ 20
2
votes
2
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2.3k
views
IRanges which are not S4 generic: endoapply mendoapply error in loading oligoclasses
iranges oligoclasses BiocGenerics
6.5 years ago GENOMIC_region • 0
0
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7
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2.0k
views
oligo and GenericPDInfo
affy oligoclasses oligo package pdinfobuilder annotationdbi
updated 7.5 years ago by 67k • written 7.5 years ago by ▴ 510
2
votes
1
reply
1.4k
views
Output of ArrayExpress() function
oligo oligoclasses arrayexpress
updated 7.9 years ago by 67k • written 7.9 years ago by • 0
2
votes
4
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1.6k
views
getProbeInfo and exprs return matrices and data.frames of different dimensions
oligo oligoclasses affy
updated 8.2 years ago by 67k • written 8.2 years ago by • 0
0
votes
2
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2.7k
views
Cannot install Oligo package
oligo oligoclasses
8.4 years ago Anna Dvorkin ▴ 40
0
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2
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2.0k
views
pdInfoBuilder fails on Affy's GeneChip Human Transcriptome Array 2.0
BiocViews Annotation Organism biocViews oligo oligoClasses BiocViews BiocViews Annotation
updated 9.6 years ago by ▴ 20 • written 10.9 years ago by ▴ 40
0
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0
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1.6k
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Error using oligo package with Affymetrix Arabidopsis Gene ST1.0 array data: paCalls() returns error 'vector would be too long'
oligo oligoClasses oligo oligoClasses
11.0 years ago Peter Crisp ▴ 10
0
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1
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1.7k
views
limma2annaffy
GO GUI annaffy oligo oligoClasses KEGGREST GO GUI annaffy oligo oligoClasses KEGGREST
updated 11.0 years ago by 67k • written 11.0 years ago by ★ 13k
0
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8
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2.4k
views
vsn preprocess with oligo package
vsn oligo oligoClasses vsn oligo oligoClasses
updated 12.0 years ago by 67k • written 12.0 years ago by ▴ 110
0
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4
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3.0k
views
Problems with 'affxparser' package
oligoClasses oligoClasses
12.0 years ago Valor Becerra, Luis Miguel ▴ 30
3
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4
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1.9k
views
cause 'memory not mapped' when use oligo
oligo oligoClasses oligo oligoClasses
updated 12.3 years ago by ▴ 50 • written 12.3 years ago by ★ 1.3k
0
votes
4
replies
3.2k
views
Error : package slot missing from signature for generic
Biobase lumi oligoClasses Biobase lumi oligoClasses
12.4 years ago Mark Cowley ▴ 910
0
votes
2
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1.6k
views
pdInfoBuilder fails on the new Arabidopsis Gene ST 1.0 & 1.1 arrays
Annotation oligo pdInfoBuilder oligoClasses Annotation oligo pdInfoBuilder oligoClasses
updated 12.8 years ago by ★ 4.3k • written 12.8 years ago by ▴ 630
0
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0
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1.5k
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Question about using oligo and SNPchip for copy number analysis
SNP Cancer graph oligo SNPchip oligoClasses VanillaICE crlmm SNP Cancer graph oligo
15.6 years ago Min-Han Tan ▴ 40
0
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1
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1.1k
views
Bioconductor Digest, Vol 68, Issue 7
oligo pdInfoBuilder oligoClasses oligo pdInfoBuilder oligoClasses
written 16.2 years ago by ▴ 70
18 results • Page 1 of 1
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Answer: DESeq error: counts matrix should be numeric, currently it has mode: character by ATpoint ★ 4.6k
R thinks your data are characters (e.g. "1", "2", instead of 1, 2) so given that your `counts_data` indeed only contains counts, do: `mo…
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EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
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Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
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It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
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