Bioconductor Noiseq

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940

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NOISeq withoutreplicate Noiseq

updated 19 months ago by ATpoint ★ 4.7k • written 19 months ago by Rutuja • 0

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RNAseq RNASeqData NOISeq

2.8 years ago Pratibha ▴ 10

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1.1k

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DESeq2 NOISeq edgeR

updated 4.2 years ago by ATpoint ★ 4.7k • written 4.2 years ago by Themis • 0

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deseq2 noiseq lowcounts rnaseq

updated 3.2 years ago by Michael Love 43k • written 4.5 years ago by andreia ▴ 10

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noiseq RNA-seq quality control

updated 10 months ago by baptiste.bidon • 0 • written 5.6 years ago by Arindam ▴ 80

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851

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software error NOISeq

5.7 years ago jledmondson • 0

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1.1k

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noiseq rsubread tophat bowtie bowtie2

5.8 years ago Marcelo Laia ▴ 450

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noiseq logfoldchange

6.9 years ago Aurora ▴ 20

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1.2k

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R noiseq data.frame

7.1 years ago aokoro • 0

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1.9k

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complexheatmap Rstudio NOISeq

7.5 years ago Luiz • 0

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1.7k

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rnaseq de analysis gene filtering noiseq

updated 7.6 years ago by James W. MacDonald 68k • written 7.6 years ago by Mau ▴ 50

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deseq2 cqn noiseq

updated 7.9 years ago by Michael Love 43k • written 7.9 years ago by glmazzo ▴ 10

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noiseq batch effect ARSyNseq

9.4 years ago lina.faller ▴ 10

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1.2k

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RNASeq NOISeq RNASeq NOISeq

12.0 years ago Guest User ★ 13k

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3.0k

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NOISeq NOISeq

updated 12.4 years ago by Dan Tenenbaum ★ 8.2k • written 12.4 years ago by Guest User ★ 13k

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NOISeq NOISeq

updated 12.4 years ago by Sean Davis 21k • written 12.4 years ago by Fatemehsadat Seyednasrollah ▴ 260

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1.3k

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NOISeq NOISeq

13.0 years ago Guest User ★ 13k

17 results • Page 1 of 1

Recent ...

Replies

Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene by Wolfgang RAFFELSBERGER ▴ 140

Yes, rtools4.4 is installed (and works for making my own packages)

Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene by Wolfgang RAFFELSBERGER ▴ 140

Thank you, this solved the problem !

Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene by ATpoint ★ 4.7k

I cannot reproduce this on Windows 11. Is rtools installed to allow compilation from source on Windows?

Comment: Guidance Needed: Best Practices for Handling Technical Replicates in RNA-seq Ana by ATpoint ★ 4.7k

You've asked this at biostars where it belongs. This is not directly related to Bioconductor.

Comment: Conumee with EPICv2 Segment function by zpingfeng • 0

I have the same issue too for the analysis lack of sample replicates. It was fine for the samples with replicates

Votes

Comment: Identifying potentially associated gene set to drug response using GSVA

Answer: Limma - Complex 2-way multi-level contrast with paired samples

Comment: Can't post a question?

Answer: Limma - Complex 2-way multi-level contrast with paired samples

Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks

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