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mlseq
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Data preparation and Machine learning on time course RNAseq data
machine learning
deep learning
RNAseq
MLSeq
5.4 years ago
A
▴ 40
0
votes
0
replies
966
views
MLSeq plot results
MLSeq
7.5 years ago
jonessara770
▴ 10
0
votes
0
replies
1.6k
views
Hierarchical Random Forest classifier
rnaseq
machinelearning
random forest
mlseq
8.4 years ago
anthony.hawkins
▴ 10
0
votes
2
replies
1.3k
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MLSeq package: using z-score normalized data as input?
MLSeq
8.7 years ago • updated 8.6 years ago
philipp24
▴ 30
0
votes
3
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1.5k
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MLSeq Mathematical Concepts
Classification
edgeR
DESeq
MLSeq
Classification
edgeR
DESeq
MLSeq
updated 10.1 years ago by
Wolfgang Huber
★ 13k • written 10.1 years ago by
Dario Strbenac
★ 1.5k
5 results • Page
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Answer: Behaviour of featureCounts when quantifying multi-mapping reads
by
Yang Liao
▴ 400
Both `v1.5.0` and `v1.6.4` versions are very old. I suggest upgrading to `v2.0.6` (the latest version). There was a change regarding the `…
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
Ozan
• 0
Sounds good. Thanks again!
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
James W. MacDonald
66k
Ah, ok. Doesn't really matter though. Try using `UniProt.ws`.
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
Ozan
• 0
I believe my `NCBI.sqlite` database is located in the same directory, but for some reason it seems to be empty. Even in the File explorer i…
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
by
James W. MacDonald
66k
You have to do that in the directory that contains your NCBI.sqlite database. ``` > library(RSQLite) > con <- dbConnect(SQLite(), "thisfil…
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Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
Comment: Error: no such table: main.gene2pubmed when running makeOrgPackageFromNCBI() fr
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
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