Bioconductor Mirna-seq

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6.6k

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deseq2 rnaseq mirna-seq differential gene expression

written 7.2 years ago by klalit1803 ▴ 10

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1.3k

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mirna-seq limma

updated 6.7 years ago by Gordon Smyth 52k • written 6.7 years ago by Michael Stone • 0

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1.2k

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mirna-seq

updated 6.9 years ago by Levi Waldron ★ 1.1k • written 6.9 years ago by ndiayediop2 • 0

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958

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mirna-seq

7.0 years ago • updated 6.9 years ago ndiayediop2 • 0

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3.2k

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r survival analysis rtcga tcgabiolinks mirna-seq

6.9 years ago atakanekiz ▴ 30

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889

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deseq2 differentially expression mirna-seq mirna target prediction

updated 6.9 years ago by Michael Love 43k • written 6.9 years ago by Björn • 0

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1.3k

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DESeq2 mirna-seq small RNA-seq

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by CandiceChuDVM ▴ 40

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4.9k

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deseq2 mirna-seq experimental design differential expression

updated 8.0 years ago by Gavin Kelly ▴ 690 • written 8.0 years ago by francesco.gandolfi ▴ 10

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5.3k

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miRNA mirna-seq

updated 8.1 years ago by Jon Bråte ▴ 260 • written 8.1 years ago by just • 0

9 results • Page 1 of 1

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Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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