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minfidata
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1
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570
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normalizatino of dna methylation EPIC data
DNA
minfiData
minfiDataEPIC
DNAMethylation
minfi
7 weeks ago
user_bioinfo
• 0
0
votes
1
reply
573
views
minfi - bumphunter value problem
bumphunter
minfiData
minfi
bumphun
updated 8 months ago by
James W. MacDonald
68k • written 9 months ago by
kumakeren16
• 0
1
vote
4
replies
656
views
minfi::read.metharray.exp
minfiData
minfi
updated 11 months ago by
Basti
▴ 780 • written 11 months ago by
clacarion
• 0
0
votes
1
reply
506
views
Matrix multiplication error to estimate telomere length
methylclockData
minfi
methylclock
minfidata
updated 13 months ago by
James W. MacDonald
68k • written 13 months ago by
sharangiiv
• 0
0
votes
3
replies
1.5k
views
Batch correction using control probes in EPIC array data
RnBeads
minfiData
minfi
EPICarray
updated 23 months ago by
Basti
▴ 780 • written 23 months ago by
Jitendra
▴ 10
0
votes
4
replies
1.6k
views
Sex estimation problems in [estimateCellCounts]: methylation arrays
methylationArrayAnalysis
minfiData
minfi
MethylationArrayData
MethylationArray
updated 2.1 years ago by
James W. MacDonald
68k • written 2.1 years ago by
Grace
• 0
0
votes
5
replies
2.0k
views
minfi error read.metharray.exp
methylationArrayAnalysis
minfiData
minfi
MethylationArrayData
MethylationArray
written 2.1 years ago by
Grace
• 0
0
votes
0
replies
1.2k
views
Error in champ.svd - function 'EstDimRMTv2' within champ.svd acting inconsistently?
minfiData
ChAMP
3.3 years ago
behr201
• 0
0
votes
0
replies
1.1k
views
minfi - estimateCellCounts2-proportions sum more than 1
minfi
minfiData
MethylationArrayData
3.7 years ago
ponche_de_kiwi
• 0
1
vote
1
reply
2.7k
views
plotSex error message
minfiData
plotsex
minfi
minfiDataEPIC
r
updated 4.1 years ago by
suman
• 0 • written 4.1 years ago by
Bethan
• 0
1
vote
2
replies
2.3k
views
Minfi read.metharray.sheet error
minfi
methylation
dataimport
minfidata
missmethyl
updated 6.6 years ago by
James W. MacDonald
68k • written 6.6 years ago by
moldach
▴ 20
0
votes
1
reply
1.7k
views
Problem loading minfi on macOS
minfi
minfidata
rgl.
mac os x
el capitan
updated 8.9 years ago by
Kasper Daniel Hansen
★ 6.5k • written 8.9 years ago by
holbrookjoanna
• 0
0
votes
1
reply
2.5k
views
Analyzing 450k Methylation from TCGA Website
minfidata
minfi
illuminahumanmethylation450k.db
illuminahumanmethylation450kanno.ilmn12.hg19
10.0 years ago
alejandretheodore
• 0
0
votes
2
replies
2.2k
views
Help resovling"Error in lm.fit" with 'dmpFinder' function in minfi
minfi
minfidata
illumina
methylation
dmpfinder
updated 10.6 years ago by
James W. MacDonald
68k • written 10.6 years ago by
michael.zulyniak
• 0
14 results • Page
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Comment: BiocParallel_1.40.1.tar.gz not available
by
Johan
• 0
It worked. Thanks :)
Comment: Model performance for spline modelling of RNA-seq timecourses in edgeR
by
skiaphrene
▴ 10
Dear Gordon, Thank you very much for your prompt reply. I agree with the limma/edgeR perspective of including all potentially explanatory…
Comment: how to use `arrayWeightsQuick()`?
by
Gordon Smyth
52k
What sort of object is `expression`? Does it contain any missing values?
Answer: Deleted:No significant MVPs with a BH adjusted P-value below 0.05
by
shocked.tick.zyet
• 0
Dealing with those adjusted p-values in ChAMP can feel like a frustrating game of [Uno Online](https://unoonlinefree.com) , especially when…
Comment: DESeq2 lfcShrink drastic shrinkage
by
Nick
• 0
Did you ever figure out the cause of this? I am seeing very similar results and wondering if you have advice on how you may have resolved t…
Votes
Answer: BiocParallel_1.40.1.tar.gz not available
Modelling gene program dynamics across time with {lemur}
A: DESeq2 one group vs multiple groups comparison in presence of batch effect
Comment: BiocParallel_1.40.1.tar.gz not available
Comment: BiocParallel_1.40.1.tar.gz not available
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