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minfiData
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1
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594
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normalizatino of dna methylation EPIC data
DNA
minfiData
minfiDataEPIC
DNAMethylation
minfi
9 weeks ago
user_bioinfo
• 0
0
votes
1
reply
595
views
minfi - bumphunter value problem
bumphunter
minfiData
minfi
bumphun
updated 9 months ago by
James W. MacDonald
68k • written 9 months ago by
kumakeren16
• 0
1
vote
4
replies
669
views
minfi::read.metharray.exp
minfiData
minfi
updated 12 months ago by
Basti
▴ 780 • written 12 months ago by
clacarion
• 0
0
votes
1
reply
514
views
Matrix multiplication error to estimate telomere length
methylclockData
minfi
methylclock
minfidata
updated 14 months ago by
James W. MacDonald
68k • written 14 months ago by
sharangiiv
• 0
0
votes
3
replies
1.6k
views
Batch correction using control probes in EPIC array data
RnBeads
minfiData
minfi
EPICarray
updated 23 months ago by
Basti
▴ 780 • written 23 months ago by
Jitendra
▴ 10
0
votes
4
replies
1.7k
views
Sex estimation problems in [estimateCellCounts]: methylation arrays
methylationArrayAnalysis
minfiData
minfi
MethylationArrayData
MethylationArray
updated 2.1 years ago by
James W. MacDonald
68k • written 2.1 years ago by
Grace
• 0
0
votes
5
replies
2.0k
views
minfi error read.metharray.exp
methylationArrayAnalysis
minfiData
minfi
MethylationArrayData
MethylationArray
written 2.1 years ago by
Grace
• 0
0
votes
0
replies
1.2k
views
Error in champ.svd - function 'EstDimRMTv2' within champ.svd acting inconsistently?
minfiData
ChAMP
3.3 years ago
behr201
• 0
0
votes
0
replies
1.1k
views
minfi - estimateCellCounts2-proportions sum more than 1
minfi
minfiData
MethylationArrayData
3.7 years ago
ponche_de_kiwi
• 0
1
vote
1
reply
2.7k
views
plotSex error message
minfiData
plotsex
minfi
minfiDataEPIC
r
updated 4.2 years ago by
suman
• 0 • written 4.2 years ago by
Bethan
• 0
1
vote
2
replies
2.3k
views
Minfi read.metharray.sheet error
minfi
methylation
dataimport
minfidata
missmethyl
updated 6.6 years ago by
James W. MacDonald
68k • written 6.6 years ago by
moldach
▴ 20
0
votes
1
reply
1.8k
views
Problem loading minfi on macOS
minfi
minfidata
rgl.
mac os x
el capitan
updated 9.0 years ago by
Kasper Daniel Hansen
★ 6.5k • written 9.0 years ago by
holbrookjoanna
• 0
0
votes
1
reply
2.5k
views
Analyzing 450k Methylation from TCGA Website
minfidata
minfi
illuminahumanmethylation450k.db
illuminahumanmethylation450kanno.ilmn12.hg19
10.0 years ago
alejandretheodore
• 0
0
votes
2
replies
2.3k
views
Help resovling"Error in lm.fit" with 'dmpFinder' function in minfi
minfi
minfidata
illumina
methylation
dmpfinder
updated 10.6 years ago by
James W. MacDonald
68k • written 10.6 years ago by
michael.zulyniak
• 0
14 results • Page
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Recent ...
Replies
Comment: Module membership vs gene significance result and Modules-trait relationships re
by
Vinaya
• 0
Hi. I am having the same issue, and haven't found a solution still.
Comment: Feature Counts - potential bug with outfile.jcounts
by
Tom
• 0
[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…
Comment: Filtering after DESeq
by
caroline.zanchi
• 0
I am going to try this right now, thanks !
Comment: Bioconductor 3.20 Release Schedule
by
randyprice13102000
• 0
This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/
Comment: Filtering after DESeq
by
ATpoint
★ 4.8k
The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …
Votes
Answer: CluserProfiler message "No gene can be mapped"
A: Minfi issue: return code from pthread_create() is 22
Comment: Filtering after DESeq
Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
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