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Showing :
mfuzz
•
reset
3
votes
6
replies
1.1k
views
Average biological replicates in RNA-seq
Mfuzz
RNASeq
9 months ago • updated 8 months ago
boczniak767
▴ 740
0
votes
0
replies
511
views
Mfuzz package loading issues
Mfuzz
MacBook
loadingissues
12 months ago
Jon
• 0
0
votes
4
replies
1.0k
views
Mfuzz package loading issues
Mfuzz
loadingissues
macbook
12 months ago
Jon
• 0
0
votes
2
replies
1.0k
views
R: problem with running time-series analysis software: Mfuzz
time-series
mfuzz
replace=FALSE
2.5 years ago
soda
▴ 80
1
vote
1
reply
691
views
Fuzzy C means clustering
Mfuzz
updated 4.0 years ago by
James W. MacDonald
67k • written 4.0 years ago by
syed.imtiazaziz
• 0
0
votes
0
replies
774
views
Mfuzz time-series design
mfuzz
normalization
5.4 years ago
xizhang
• 0
3
votes
9
replies
2.9k
views
DESeq2 Normalized Counts for Mfuzz
deseq2
rnaseq
mfuzz
updated 6.3 years ago by
Michael Love
42k • written 6.3 years ago by
rbenel
▴ 40
0
votes
0
replies
1.1k
views
PROBLEM WITH MFUZZ
mfuzz
fold change
log2
STANDARDISATION
6.4 years ago
prakashpandey1111
• 0
0
votes
0
replies
759
views
For optimal c and m using fuzzy c-means clustering
mfuzz
6.4 years ago
prakashpandey1111
• 0
1
vote
1
reply
1.5k
views
expression profiles between DESeq2 and Mfuzz
deseq2
mfuzz
differential expression
timecourse
updated 8.1 years ago by
Michael Love
42k • written 8.1 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
2
replies
2.2k
views
cluster composition in Mfuzz package
cluster
mfuzz
gene names
updated 8.7 years ago by
Assa Yeroslaviz
★ 1.5k • written 8.7 years ago by
thomas.dobrenel
• 0
1
vote
1
reply
5.7k
views
Mfuzz: fill.NA - Warning messages: argument is not numeric or logical: returning NA
mfuzz
clustering
bioinformatics
proteomics
timecourse
updated 8.7 years ago by
Laurent Gatto
1.6k • written 8.7 years ago by
under-waterworld
• 0
0
votes
0
replies
1.2k
views
Small bug in mfuzz.plot
Mfuzz
8.8 years ago
musically.ut
• 0
0
votes
0
replies
1.6k
views
mfuzz problems
Clustering
Mfuzz
Clustering
Mfuzz
10.5 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
1.2k
views
[Mfuzz] y-axis values
Clustering
Mfuzz
Clustering
Mfuzz
13.6 years ago
boczniak767
▴ 740
0
votes
3
replies
4.2k
views
[Mfuzz] Error in cmeans(exprs(eset)
Mfuzz
Mfuzz
updated 6 months ago by
Caio
• 0 • written 13.6 years ago by
boczniak767
▴ 740
0
votes
1
reply
1.7k
views
Mfuzz plot -pdf
Mfuzz
Mfuzz
updated 15.6 years ago by
James W. MacDonald
67k • written 15.6 years ago by
dorothyc
▴ 140
0
votes
1
reply
1.5k
views
Mfuzz package
Clustering
Mfuzz
Clustering
Mfuzz
updated 15.6 years ago by
James W. MacDonald
67k • written 15.6 years ago by
dorothyc
▴ 140
0
votes
4
replies
6.4k
views
Heatmap without using clustering result
Clustering
Mfuzz
Clustering
Mfuzz
updated 15.7 years ago by
Steve Pederson
▴ 60 • written 15.7 years ago by
gregory voisin
▴ 430
19 results • Page
1 of 1
Recent ...
Replies
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
by
Robert Castelo
★ 3.4k
Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…
Answer: DESeq2 rerun returns different results
by
ATpoint
★ 4.5k
DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…
Answer: [How to construct a model.matrix ]
by
Gordon Smyth
51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
by
rania.alanany
• 0
Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…
Comment: Merge Replicates vs Mixed Model
by
abadgerw
• 0
@gabrielhoffman any insight?
Votes
Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta
A: Some questions for remove batch effect by using mnnCorrect
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: [How to construct a model.matrix ]
Answer: Handling biological replicates in DESeq2
Awards
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prabin.dm
• 0
Popular Question
to
Robert Castelo
★ 3.4k
Popular Question
to
Michael Stadler
▴ 350
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to
ATpoint
★ 4.5k
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to
James W. MacDonald
67k
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