Bioconductor Mfuzz

Showing : mfuzz • reset

votes

replies

1.2k

views

Mfuzz RNASeq

10 months ago boczniak767 ▴ 740

votes

replies

527

views

Mfuzz MacBook loadingissues

13 months ago Jon • 0

votes

replies

1.0k

views

Mfuzz loadingissues macbook

13 months ago Jon • 0

votes

replies

1.0k

views

time-series mfuzz replace=FALSE

2.6 years ago soda ▴ 80

vote

700

views

Mfuzz

updated 4.1 years ago by James W. MacDonald 67k • written 4.1 years ago by syed.imtiazaziz • 0

votes

replies

797

views

mfuzz normalization

5.5 years ago xizhang • 0

votes

replies

2.9k

views

deseq2 rnaseq mfuzz

updated 6.4 years ago by Michael Love 43k • written 6.4 years ago by rbenel ▴ 40

votes

replies

1.1k

views

mfuzz fold change log2 STANDARDISATION

6.5 years ago prakashpandey1111 • 0

votes

replies

770

views

mfuzz

6.5 years ago prakashpandey1111 • 0

vote

1.5k

views

deseq2 mfuzz differential expression timecourse

updated 8.2 years ago by Michael Love 43k • written 8.2 years ago by Assa Yeroslaviz ★ 1.5k

votes

replies

2.3k

views

cluster mfuzz gene names

updated 8.7 years ago by Assa Yeroslaviz ★ 1.5k • written 8.7 years ago by thomas.dobrenel • 0

vote

5.7k

views

mfuzz clustering bioinformatics proteomics timecourse

updated 8.8 years ago by Laurent Gatto 1.6k • written 8.8 years ago by under-waterworld • 0

votes

replies

1.2k

views

Mfuzz

8.9 years ago musically.ut • 0

votes

replies

1.6k

views

Clustering Mfuzz Clustering Mfuzz

10.6 years ago Assa Yeroslaviz ★ 1.5k

votes

replies

1.2k

views

Clustering Mfuzz Clustering Mfuzz

13.7 years ago boczniak767 ▴ 740

votes

replies

4.2k

views

Mfuzz Mfuzz

updated 7 months ago by Caio • 0 • written 13.7 years ago by boczniak767 ▴ 740

votes

1.7k

views

Mfuzz Mfuzz

updated 15.7 years ago by James W. MacDonald 67k • written 15.7 years ago by dorothyc ▴ 140

votes

1.5k

views

Clustering Mfuzz Clustering Mfuzz

updated 15.7 years ago by James W. MacDonald 67k • written 15.7 years ago by dorothyc ▴ 140

votes

replies

6.4k

views

Clustering Mfuzz Clustering Mfuzz

updated 15.8 years ago by Steve Pederson ▴ 60 • written 15.8 years ago by gregory voisin ▴ 430

19 results • Page 1 of 1

Recent ...

Replies

Comment: nightmare to make custom txdb for genomes from ToxoDB by James W. MacDonald 67k

Thanks Hervé! Very helpful. However, I believe that `keepStandardChromosomes` gets called by `gDNAx`, and it appears not to work correctly.…

Answer: nightmare to make custom txdb for genomes from ToxoDB by Hervé Pagès 16k

Is this for genome assembly TGA4? https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000006565.2/ If that's the case then: ``` library(t…

Answer: nightmare to make custom txdb for genomes from ToxoDB by James W. MacDonald 67k

Your post title is misleading. You have no problem whatsoever generating the `TxDb`, the problem is using it with `gDNAx`, which attempts t…

Answer: Normalizing batch effects using technical replicates for DGE analysis between tw by Gordon Smyth 52k

Just fit a model `~condition + experiment` where `condition` has three levels A, B and C. Ideally, use limma and include duplicate correlat…

Comment: Error in get_anno_data(ontology) : ontology not supported yet... by GODseeker • 0

thank u so much ,god bless u,my dear friend.

Votes

Answer: nightmare to make custom txdb for genomes from ToxoDB

A: Advice on correcting for batch effect using DESeq2

Comment: Feature Counts - potential bug with outfile.jcounts

Answer: Feature Counts - potential bug with outfile.jcounts

Comment: Can we get beta values with DMRcate package

Awards • All

Popular Question to martin.grigorov ▴ 10

Scholar to James W. MacDonald 67k