Bioconductor Methylationepic

Showing : methylationepic • reset

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methylationEPIC minfi microarray epigenetics EPIC

5.9 years ago firestar ▴ 20

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microarray methylationEPIC epigenetics minfi EPIC

5.9 years ago firestar ▴ 20

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ChAMP champ 2.9.10 methylationepic

6.8 years ago david.ch • 0

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rnbeads methylation methylationepic dna methylation

6.9 years ago gabrielrfries • 0

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champ methylationepic

updated 7.0 years ago by Yuan Tian ▴ 290 • written 7.0 years ago by csappleby-mallinder1 • 0

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ChAMP methylationepic epicarray epigenomics

updated 7.3 years ago by rcavalca ▴ 140 • written 7.3 years ago by karthikrpad ▴ 10

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minfi methylationepic illuminahumanmethylationepicanno.ilmn10b.hg19 SNP

7.5 years ago Ellen O • 0

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methylation illumina EPIC methylationepic idat

updated 7.7 years ago by Guido Hooiveld ★ 4.1k • written 7.7 years ago by Ellen O • 0

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methylation epic microarray minfi methylationepic

7.9 years ago nhejazi • 0

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shinymethyl minfi epic microarray methylationepic qualitycontrol

7.9 years ago chelsey.ju • 0

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minfi illumina methylationEPIC densityplot

8.0 years ago annabelle.congras ▴ 10

11 results • Page 1 of 1

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Answer: Problems with GSEA by Guido Hooiveld ★ 4.1k

The error `Duplicate values in names(stats) not allowed` (from `fgsea` that is used under the hood) shows that the input is not unique; in …

Answer: Error compiling Rbowtie2 in R-4.4 (Bioconductor 3.20 and probably 3.19) by ja.garcia • 0

It has been fixed by the Rbowtie2 maintainers in version 2.12.2. Thank you for the quick fix!

Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by Amora • 0

You did a great job giving an overview.....[slope][1] better than the bioconductor group! [1]: https://slopeio.org

Comment: contrast matrix design for a continuous variable by dtzhu337 • 0

Hi Gordon, Thank you very much for your answer. Actually the variable X is the age, which I am also interested in. Somehow, age and V1 are…

Answer: SingleCellExperiment convenience function for metadata+expression? by Peter Hickey ▴ 750

Hi Sarah, `scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…

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Answer: SingleCellExperiment convenience function for metadata+expression?

How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.

Answer: EdgeR Biological CVs

Answer: Error in download.file for TCGAutils::symbolsToRanges

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Popular Question to Guido Hooiveld ★ 4.1k