Showing : methylationEPIC • reset
0
votes
0
replies
1.3k
views
Beta values and M values cluster differently
methylationEPIC minfi microarray epigenetics EPIC
5.9 years ago firestar ▴ 20
0
votes
0
replies
975
views
Best normalisation method
microarray methylationEPIC epigenetics minfi EPIC
5.9 years ago firestar ▴ 20
3
votes
6
replies
2.4k
views
could not find function "champ.load"
ChAMP champ 2.9.10 methylationepic
6.9 years ago david.ch • 0
0
votes
0
replies
1.2k
views
differential methylation analysis with RnBeads
rnbeads methylation methylationepic dna methylation
7.0 years ago gabrielrfries • 0
0
votes
1
reply
2.2k
views
ChAMP Methylation analysis error code "could not find function champ.load"
champ methylationepic
updated 7.0 years ago by ▴ 290 • written 7.0 years ago by • 0
3
votes
4
replies
3.5k
views
Error while using champ.svd() function in subset of data
ChAMP methylationepic epicarray epigenomics
updated 7.4 years ago by ▴ 140 • written 7.4 years ago by ▴ 10
0
votes
0
replies
1.1k
views
Error when changing the database for minfi dropLociWithSnps
minfi methylationepic illuminahumanmethylationepicanno.ilmn10b.hg19 SNP
7.6 years ago Ellen O • 0
0
votes
2
replies
2.3k
views
Illumina methylationEPIC demo data in IDAT format?
methylation illumina EPIC methylationepic idat
updated 7.7 years ago by ★ 4.1k • written 7.8 years ago by • 0
0
votes
4
replies
1.9k
views
minfi "mapToGenome" dimension error
methylation epic microarray minfi methylationepic
7.9 years ago nhejazi • 0
0
votes
0
replies
1.2k
views
Shinymethyl 850K Array quality control signal cutoffs
shinymethyl minfi epic microarray methylationepic qualitycontrol
8.0 years ago chelsey.ju • 0
0
votes
3
replies
1.9k
views
MINFI missing samples in qcreports and densityplots
minfi illumina methylationEPIC densityplot
8.1 years ago annabelle.congras ▴ 10
11 results • Page 1 of 1
Recent ...
Replies
Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0
how you did it pls explain
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k
If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…
Votes
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
Comment: Unused arguments error without used arguments in GSVA?
Awards • All
Teacher to Gordon Smyth 52k
Scholar to James W. MacDonald 68k
Popular Question to Sara ▴ 20
Scholar to Michael Love 43k
Popular Question to Malcolm Cook ★ 1.6k
Locations • All
WEHI, Melbourne, Australia, 1 hour ago
United States, 1 hour ago
Belgium, 1 hour ago
Germany, 1 hour ago
Spain, 2 hours ago
Traffic: 529 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6