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methyAnalysis
•
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0
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0
replies
812
views
Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression
methyAnalysis
MethylationArray
4.4 years ago
coobzie
• 0
1
vote
2
replies
1.7k
views
Methylation data visualization using methyAnalysis with minfi
methylation
microarray
illumina
minfi
methyanalysis
updated 6.3 years ago by
Ou, Jianhong
★ 1.3k • written 6.3 years ago by
Adam_M
• 0
0
votes
0
replies
907
views
methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
7.2 years ago
mcahn
• 0
2
votes
4
replies
3.2k
views
Problem in installing Bioconductor packages due to "IRanges"
lumi
methylumi
methyAnalysis
7.3 years ago
topijush
▴ 10
0
votes
0
replies
1.0k
views
Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
7.4 years ago
charleneee95
• 0
1
vote
9
replies
4.4k
views
strange results from differential methylation analysis using limma
limma
methylation
methyanalysis
IMA
updated 2.9 years ago by
Sean Davis
21k • written 8.1 years ago by
RC
• 0
0
votes
0
replies
1.2k
views
methyAnalysis: heatmapByChromosome not works
methyAnalysis
8.5 years ago
Shicheng Guo
• 0
0
votes
1
reply
1.1k
views
problem with identifySigDMR command
methyAnalysis
8.7 years ago
yuping.zhang
• 0
0
votes
0
replies
1.9k
views
methyAnalysis error with example data
methyanalysis
8.9 years ago
Tom
▴ 10
4
votes
10
replies
5.2k
views
Illumina MethylationEPIC vs. 450K
methylumi
minfi
illuminahumanmethylation450k.db
450k
methyanalysis
updated 9.1 years ago by
Peter Hickey
▴ 750 • written 9.1 years ago by
Ahdee
▴ 60
1
vote
13
replies
2.7k
views
MethylAid package visualize function not opening a web browser
illimina 450k methylation
methyanalysis
methylaid
9.5 years ago
jdangelo
• 0
0
votes
1
reply
4.8k
views
methyAnalysis M values and Beta Values
methyAnalysis
methyanalysis
450k
updated 10.1 years ago by
Pan Du
▴ 80 • written 10.1 years ago by
andrew.j.skelton73
▴ 370
1
vote
5
replies
1.6k
views
Understanding methyAnalysis Results
methyAnalysis
methyanalysis
methylation
illuminahumanmethylation450k.db
updated 10.1 years ago by
Pan Du
▴ 80 • written 10.1 years ago by
andrew.j.skelton73
▴ 370
0
votes
0
replies
1.9k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
11.1 years ago
Allegra Petti
▴ 120
0
votes
8
replies
2.7k
views
methyAnalysis for DMR identification
convert
methyAnalysis
convert
methyAnalysis
updated 11.1 years ago by
Giovanni Calice
▴ 160 • written 11.1 years ago by
Guest User
★ 13k
0
votes
6
replies
3.4k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
updated 11.1 years ago by
James W. MacDonald
68k • written 11.2 years ago by
Guest User
★ 13k
0
votes
0
replies
1.9k
views
Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer
charm
minfi
methyAnalysis
Cancer
charm
minfi
methyAnalysis
12.2 years ago
Ed Schwalbe
▴ 20
0
votes
2
replies
1.5k
views
genoset:::initGenoSet
methyAnalysis
methyAnalysis
updated 12.2 years ago by
Pan Du
▴ 440 • written 12.2 years ago by
Schalkwyk, Leonard
▴ 20
0
votes
2
replies
2.0k
views
Loading Data into MethyAnalysis
Microarray
methyAnalysis
Microarray
methyAnalysis
updated 12.3 years ago by
Pan Du
▴ 440 • written 12.3 years ago by
Guest User
★ 13k
0
votes
1
reply
1.3k
views
methyAnalysis methyGenoSet function
methyAnalysis
methyAnalysis
updated 12.3 years ago by
Sean Davis
21k • written 12.3 years ago by
Giancarlo
▴ 10
0
votes
0
replies
1.3k
views
importing data problem with methyAnalysis package
Biophysics
Annotation
Preprocessing
annotate
lumi
methyAnalysis
Biophysics
Annotation
lumi
12.3 years ago
Pan Du
▴ 440
21 results • Page
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Answer: Version conflict when pushing to scQTLtools devel branch
by
shepherl
4.1k
There is a Bioconductor release today. There were notifications on the bioc-devel mailing list https://stat.ethz.ch/pipermail/bioc-devel…
Comment: DiffBind can't find a DAR
by
Mengjun
• 0
The details about this question: I have 4 samples with 2 conditions( ctrl_1, ctrl_2, ko_1, ko_2), i use these 4 samples as input. Here is …
Comment: DiffBind can't find a DAR
by
Mengjun
• 0
Thank you very much for pointing out this shortcoming. I will improve it.
Comment: samtools loading in R
by
Charlie
• 0
This is obviously a very late answer but I had a similar error: > sh: samtools: command not found > > sh: samtools: command not found > …
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label
by
njmcdirect
• 0
https://www.www-njmcdirect.run/
Votes
Comment: GSVA ssGSEA vs. Broad implementation of ssGSEA
Comment: GSVA ssGSEA vs. Broad implementation of ssGSEA
Answer: GSVA ssGSEA vs. Broad implementation of ssGSEA
GSVA ssGSEA vs. Broad implementation of ssGSEA
Comment: biomaRt server error, and mirrors do not help
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