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metagene
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How does distance in bins calculated? Can it be replaced with distance in bp?
metagene
metagene2
2.2 years ago
sfpacman
• 0
0
votes
1
reply
3.4k
views
Error: BiocParallel errors
Bioconductor
metagene
GenomicAlignments
updated 2.6 years ago by
lxl13260684135
• 0 • written 3.0 years ago by
barrypraveen
• 0
1
vote
2
replies
1.2k
views
metage problem with DESeq
DESeq
metagene2
metagene
updated 3.9 years ago by
ericfournier2
▴ 10 • written 3.9 years ago by
GM
▴ 10
1
vote
1
reply
1.4k
views
metagene error when plot metagene reads signal
metagene
metagene$new
updated 7.2 years ago by
Charles Joly Beauparlant
▴ 170 • written 7.2 years ago by
Wojeff
• 0
0
votes
1
reply
1.5k
views
Metagene: file import and aesthetic customization
metagene
R
ggplot2
updated 8.0 years ago by
Charles Joly Beauparlant
▴ 170 • written 8.0 years ago by
JunLVI
▴ 40
4
votes
2
replies
1.3k
views
metagene: paired-end bam as input
metagene
updated 15 months ago by
xlal
• 0 • written 8.3 years ago by
anton.kratz
▴ 60
5
votes
1
reply
1.3k
views
metagene: moving the legend
metagene
updated 8.3 years ago by
Charles Joly Beauparlant
▴ 170 • written 8.3 years ago by
anton.kratz
▴ 60
3
votes
1
reply
1.3k
views
metagene: strand orientation of plot?
metagene
updated 8.3 years ago by
Charles Joly Beauparlant
▴ 170 • written 8.3 years ago by
anton.kratz
▴ 60
3
votes
4
replies
1.8k
views
metagene ERROR in plot and other function
metagene
8.6 years ago
arinaldi
▴ 10
9 results • Page
1 of 1
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Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Comment: build samplesheet and plot profile
by
yf
• 0
![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a
Answer: I am having issues with bowtie2_build
by
James W. MacDonald
67k
Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
Answer: DEG analysis across multiple timepoints, treatments and tissues
by
Michael Love
43k
Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…
Comment: How to visualize these pathways using pathview
by
Guido Hooiveld
★ 4.1k
FYI: a similar, if not identical issue has been reported before (`pathview` has problems visualizing some pathways, but not all). You likel…
Votes
A: Doubt about the "zero expression" genes or genes with no reads at all in the co
Answer: Unable to install nloptr
Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
C: How does edgeR cpm function calculate log(CPM) values?
Answer: Selection of correct coefficients or contrasts in DESeq2
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