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meta-analysis
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3
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368
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Meta-analysis on RNA-seq data sets
meta-analysis
sva
Combat_Seq
RNAseq
8 weeks ago • updated 7 weeks ago
Travis
• 0
0
votes
1
reply
1.2k
views
What does one-sided p-value in DESeq2 mean in biological terms?
one-sided
nbinomWaldTest
p-value
meta-analysis
DESeq2
updated 3.2 years ago by
Michael Love
42k • written 3.2 years ago by
nash12
• 0
0
votes
11
replies
4.3k
views
Remove NaN from a list or replace NaN with a value.
R
meta-analysis
updated 3.3 years ago by
Tanya
• 0 • written 6.0 years ago by
morteza.hadizade
▴ 10
0
votes
7
replies
1.7k
views
Problem using load_raw() function in crossmeta R package
cross
meta-analysis
crossmeta
3.8 years ago • updated 3.7 years ago
michael.s
• 0
3
votes
1
reply
615
views
Meta-Analysis: Start with counts?
meta-analysis
updated 5.5 years ago by
Aaron Lun
★ 28k • written 5.5 years ago by
kerr
• 0
1
vote
2
replies
1.0k
views
Meta-analysis of RNAseq data
RNAseq
meta-analysis
microarray
public data sets
updated 5.8 years ago by
alexvpickering
▴ 110 • written 5.8 years ago by
Vladimir Krasikov
▴ 90
0
votes
3
replies
2.0k
views
Algorithm for between and within microarray normalisation (for meta-analysis).
microarray
meta-analysis
gene expression
updated 5.9 years ago by
Bioconductor Community
0 • written 8.3 years ago by
StephK
▴ 70
2
votes
1
reply
816
views
how do meta-analysis with Na p-value of DESeq2 ?
deseq2
meta-analysis
metaseq
updated 7.4 years ago by
Michael Love
42k • written 7.4 years ago by
ed_isfahani
• 0
0
votes
0
replies
947
views
Meta-Analysis chip-seq data
chip-seq
meta-analysis
7.5 years ago
rezapanahi222
• 0
0
votes
0
replies
906
views
tools or package for meta-analysis of chip-seq result
chipseq
meta-analysis
7.5 years ago
rezapanahi222
• 0
2
votes
4
replies
1.8k
views
R package for Meta-Analysis of CHIP-Seq data
chipseq
meta-analysis
ubuntu
7.5 years ago
rezapanahi222
• 0
6
votes
4
replies
3.4k
views
Meta-analysis of microarrays (and RNA-seq) data
meta-analysis
updated 7.6 years ago by
alexvpickering
▴ 110 • written 7.6 years ago by
giroudpaul
▴ 40
3
votes
6
replies
1.5k
views
Possible approach of compare/interpret RNA-Seq results with microarray gene expression describing the same phenotype
microarray
rnaseq
DEgenes
meta-analysis
limma
updated 7.8 years ago by
Aaron Lun
★ 28k • written 7.8 years ago by
svlachavas
▴ 830
0
votes
1
reply
1.2k
views
meta analysis of p value data by metaseq package
rnaseq
meta-analysis
p values
7.9 years ago
hassangiahi
• 0
0
votes
1
reply
1.0k
views
Meta-analysis on rna-seq data without replicates
meta-analysis
rnaseq
metarnaseq
updated 8.1 years ago by
Michael Love
42k • written 8.1 years ago by
bioinformatics
▴ 20
2
votes
5
replies
2.9k
views
Question on how to proceed and analyze 9 microarray datasets of two different platforms to perform meta-analysis
microarray
meta-analysis
cross-platform normalization
statistical inference
updated 8.4 years ago by
alexvpickering
▴ 110 • written 8.8 years ago by
Konstantinos Yeles
▴ 80
3
votes
6
replies
2.3k
views
Comparison of DE lists from different datasets of same microarray platform
microarray
DE-comparison
meta-analysis
scatter-plot
limma
8.7 years ago
Konstantinos Yeles
▴ 80
0
votes
0
replies
1.9k
views
MetaDE.pvalue: Error in xj[i]: invalid subscript type 'list'
MetaDE
meta-analysis
8.7 years ago
alexvpickering
▴ 110
4
votes
4
replies
1.5k
views
Comparing DE probes from same-platform microarrays
limma
microarray
meta-analysis
updated 8.9 years ago by
Gordon Smyth
51k • written 8.9 years ago by
clevy
▴ 10
4
votes
1
reply
2.5k
views
Meta-analysis of gene expression data by 'MetaDE'
r
meta-analysis
MetaDE
updated 8.9 years ago by
Cherif Ben Hamda
▴ 150 • written 9.3 years ago by
Agaz Hussain Wani
▴ 260
2
votes
4
replies
3.0k
views
Meta-Analysis after running limma on a normalized dataset
meta-analysis
limma
toptable
updated 9.3 years ago by
Aaron Lun
★ 28k • written 9.3 years ago by
Vani
▴ 20
21 results • Page
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Answer: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
Comment: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://www.hayalsohbet.net https://www.yerlichat.com https://www.yerlichat.net https://www.mavisim.net https://www.hayalchat.com http…
Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data
by
Melisa Tecik
• 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data
by
James W. MacDonald
67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
Answer: Allele frequencies for ALL alleles of one SNP ?
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Using Affymetrix Custom Array
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