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Job:
Bioinformatics Laboratory Head in AI or machine learning (WEHI, Australia)
bioconductor
artificialintelligence
JobPosting
machinelearning
written 18 months ago by
Gordon Smyth
52k
0
votes
0
replies
887
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Job:
PhD position in Bioinformatics in Jena
Statistics
ComputationalBiology
Aging
MachineLearning
2.1 years ago
alena.vanboemmel
• 0
0
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0
replies
1.0k
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Job:
Job as a bioinformatician in Hamburg, Germany
DimensionReduction
SingleCellData
multiomics
MachineLearning
2.2 years ago
Diego's
• 0
0
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0
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1.0k
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Job:
Group Leader (Machine Learning/AI), Centre for Molecular Medicine, University of Oslo
Biology
AI
Machinelearning
Precisionmedicine
Norway
3.0 years ago
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0
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0
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1.8k
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Hierarchical Random Forest classifier
rnaseq
machinelearning
random forest
mlseq
9.1 years ago
anthony.hawkins
▴ 10
0
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0
replies
1.7k
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Job:
Graduate Student in Cancer Genomics / Machine Learning Brigham Young University
machinelearning
cancer
Job
9.2 years ago
Stephen Piccolo
▴ 600
1
vote
2
replies
1.8k
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Possible methodologies of machine learning in R that can assimilate continuous variables along gene expression data for microarray classification
classification
machinelearning
microarray
multivariate
caret
updated 9.4 years ago by
Steve Lianoglou
★ 13k • written 9.4 years ago by
svlachavas
▴ 840
1
vote
1
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2.0k
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Cannot specify probability function for extraTrees model in caret package
caret
extraTrees
machinelearning
9.7 years ago
liuy12
• 0
0
votes
0
replies
1.6k
views
Error in R package "cancerclass" with function nvalidate
cancerclass
bioconductor
machinelearning
classification
9.8 years ago
svlachavas
▴ 840
0
votes
0
replies
1.8k
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Machine learning methods for feature selection and possible correlation with clinical data
machinelearning
clinicaldata
biomarkers
data integration
bioconductor
9.8 years ago
svlachavas
▴ 840
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Comment: DESeq2 It is correct to use interaction term for patient variability?
by
Bradley
• 0
I apologize, but I am still perplexed. I need to know the exact type of replication. Do we have many samples taken from the same tumor? You…
Comment: Differential variance analysis - can i use deseq2
by
Michael Love
43k
VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…
Answer: Use of limma R package with targeted proteomics for DE analysis
by
Gordon Smyth
52k
It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…
Comment: WGCNA
by
pammelala304
• 0
Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.
Comment: Does anyone have the command to download all of the core_nt using blast_db_get()
by
Matthew Thornton
▴ 380
Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…
Votes
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: normalizatino of dna methylation EPIC data
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
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