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liftover
•
reset
0
votes
0
replies
562
views
Human to mouse SNP conversion
liftOver
SNP
GWASTools
15 months ago
bonheur
• 0
2
votes
2
replies
1.6k
views
broken chain import in liftOver
lifto
liftOver
updated 2.1 years ago by
Marcel Ramos
700 • written 2.2 years ago by
james.dalgleish
• 0
2
votes
3
replies
1.7k
views
liftOver bug, reproducible
liftOver
rtracklayer
updated 3.4 years ago by
James W. MacDonald
66k • written 3.4 years ago by
Mikhail Dozmorov
▴ 30
0
votes
1
reply
1.4k
views
How to convert build 37 to build 38?
liftOver
updated 3.6 years ago by
shepherl
3.9k • written 3.6 years ago by
bluepebbles
• 0
0
votes
0
replies
890
views
liftOver (R-package) how to recognize the "#Partially deleted in new" in the result ???
liftOver
3.7 years ago
geneprophet
• 0
1
vote
3
replies
1.3k
views
DMRcate liftover to grch38
hg19
liftover
matrixeqtl
DMRcate
updated 5.1 years ago by
James W. MacDonald
66k • written 5.1 years ago by
yoursbassanio
▴ 10
0
votes
1
reply
1.3k
views
rtracklayer::Problem with export.bw of GRanges object created by unlisted after liftover from mm9 to mm10 of wig file
rtracklayer
export.bw
liftover
updated 5.6 years ago by
Michael Lawrence
★ 11k • written 5.6 years ago by
ang
▴ 20
0
votes
1
reply
1.2k
views
rtracklayer::liftOver parameters (minMatch)
rtracklayer
liftOver
parameters
minMatch
updated 6.2 years ago by
Michael Lawrence
★ 11k • written 6.2 years ago by
Nik dAK
▴ 10
2
votes
3
replies
2.9k
views
rtracklayer::lifOver one-to-many regions and not match UCSC
rtracklayer
liftover
bioconductor
R
updated 6.9 years ago by
Michael Lawrence
★ 11k • written 6.9 years ago by
m.guelfi
• 0
0
votes
2
replies
1.7k
views
liftOver function in rtracklayer package is not working
liftover
rtracklayer
updated 6.9 years ago by
Michael Lawrence
★ 11k • written 6.9 years ago by
beausoleilmo
• 0
2
votes
10
replies
2.2k
views
Trouble Installing lifOver workflow
software error
liftOver
workflowinstall
package installation
updated 7.8 years ago by
James W. MacDonald
66k • written 7.8 years ago by
JustGettinStarted
• 0
11 results • Page
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Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Answer: unreal negative log2fc values
by
ATpoint
★ 4.2k
I don't see why this is unrealistic. A logFC of -10 is about -1000 on normal scale. The rough difference between the mean of these counts p…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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