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liftover
•
reset
0
votes
0
replies
718
views
Human to mouse SNP conversion
liftOver
SNP
GWASTools
20 months ago
bonheur
• 0
2
votes
2
replies
2.0k
views
broken chain import in liftOver
lifto
liftOver
updated 2.5 years ago by
Marcel Ramos
700 • written 2.5 years ago by
james.dalgleish
• 0
2
votes
3
replies
1.9k
views
liftOver bug, reproducible
liftOver
rtracklayer
updated 3.8 years ago by
James W. MacDonald
67k • written 3.8 years ago by
Mikhail Dozmorov
▴ 30
0
votes
1
reply
1.7k
views
How to convert build 37 to build 38?
liftOver
updated 4.0 years ago by
shepherl
4.1k • written 4.0 years ago by
bluepebbles
• 0
0
votes
0
replies
1.0k
views
liftOver (R-package) how to recognize the "#Partially deleted in new" in the result ???
liftOver
4.1 years ago
geneprophet
• 0
1
vote
3
replies
1.5k
views
DMRcate liftover to grch38
hg19
liftover
matrixeqtl
DMRcate
updated 5.5 years ago by
James W. MacDonald
67k • written 5.5 years ago by
yoursbassanio
▴ 10
0
votes
1
reply
1.4k
views
rtracklayer::Problem with export.bw of GRanges object created by unlisted after liftover from mm9 to mm10 of wig file
rtracklayer
export.bw
liftover
updated 6.0 years ago by
Michael Lawrence
★ 11k • written 6.0 years ago by
ang
▴ 20
0
votes
1
reply
1.4k
views
rtracklayer::liftOver parameters (minMatch)
rtracklayer
liftOver
parameters
minMatch
updated 6.6 years ago by
Michael Lawrence
★ 11k • written 6.6 years ago by
Nik dAK
▴ 10
2
votes
3
replies
3.2k
views
rtracklayer::lifOver one-to-many regions and not match UCSC
rtracklayer
liftover
bioconductor
R
updated 7.3 years ago by
Michael Lawrence
★ 11k • written 7.3 years ago by
m.guelfi
• 0
0
votes
2
replies
1.9k
views
liftOver function in rtracklayer package is not working
liftover
rtracklayer
updated 7.3 years ago by
Michael Lawrence
★ 11k • written 7.3 years ago by
beausoleilmo
• 0
2
votes
10
replies
2.5k
views
Trouble Installing lifOver workflow
software error
liftOver
workflowinstall
package installation
updated 8.1 years ago by
James W. MacDonald
67k • written 8.1 years ago by
JustGettinStarted
• 0
11 results • Page
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Answer: Deseq2 res Function
by
Michael Love
43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR
by
Gordon Smyth
51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data
by
Gordon Smyth
51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix?
by
NB
• 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix?
by
James W. MacDonald
67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
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Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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