Bioconductor Liftover

Showing : liftover • reset

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707

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liftOver SNP GWASTools

20 months ago bonheur • 0

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2.0k

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lifto liftOver

updated 2.5 years ago by Marcel Ramos 700 • written 2.5 years ago by james.dalgleish • 0

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1.9k

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liftOver rtracklayer

updated 3.8 years ago by James W. MacDonald 67k • written 3.8 years ago by Mikhail Dozmorov ▴ 30

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1.7k

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liftOver

updated 4.0 years ago by shepherl 4.1k • written 4.0 years ago by bluepebbles • 0

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1.0k

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liftOver

4.0 years ago geneprophet • 0

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1.4k

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hg19 liftover matrixeqtl DMRcate

updated 5.5 years ago by James W. MacDonald 67k • written 5.5 years ago by yoursbassanio ▴ 10

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1.4k

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rtracklayer export.bw liftover

updated 6.0 years ago by Michael Lawrence ★ 11k • written 6.0 years ago by ang ▴ 20

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1.4k

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rtracklayer liftOver parameters minMatch

updated 6.6 years ago by Michael Lawrence ★ 11k • written 6.6 years ago by Nik dAK ▴ 10

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3.2k

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rtracklayer liftover bioconductor R

updated 7.2 years ago by Michael Lawrence ★ 11k • written 7.2 years ago by m.guelfi • 0

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1.9k

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liftover rtracklayer

updated 7.3 years ago by Michael Lawrence ★ 11k • written 7.3 years ago by beausoleilmo • 0

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2.5k

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software error liftOver workflowinstall package installation

updated 8.1 years ago by James W. MacDonald 67k • written 8.1 years ago by JustGettinStarted • 0

11 results • Page 1 of 1

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Comment: Bioconductor 3.18 is Released! by thelmatertl • 0

This is a release that expresses gratitude to the developers and community members for their contributions and the new features enhance the…

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta by daniela.gutierrezandrade • 0

Hello, I am running into a similar issue. After setting the design, at the beginning of the analysis I filter rows with low counts. d…

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by dseauer • 0

Thank you so much for all of your help! I really appreciate it!

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by Gordon Smyth 51k

Thanks for extra info, but be careful that the Bioconductor support site requires code to be an markdown format. Copying code with prompts …

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by dseauer • 0

Thank you so much for your reply! I am sincerely sorry- of course I do not have multiple GAL files- just one- I meant gpr files! I am so so…

Votes

A: Recommendations for combining multiple 10x runs into one SingleCellExperiment

Answer: Handling biological replicates in DESeq2

Comment: biomaRt rnorvegicus_gene_ensembl not available anymore

biomaRt rnorvegicus_gene_ensembl not available anymore

A: Does edgeR need to specify reference group?

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Commentator to James W. MacDonald 67k

Popular Question to Stefano Mangiola ▴ 20