Showing : infrastructure • reset
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News: Single Package Builder / New Package Submission
new package build machines infrastructure News
4.9 years ago shepherl 4.1k
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deseq2 DESeqDataSet size when saved
deseq2 infrastructure deseqdataset importing
updated 6.5 years ago by 43k • written 6.5 years ago by • 0
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News: Bioconductor git transition BETA phase starts now.
git svn infrastructure bioconductor News
7.7 years ago nitesh.turaga ▴ 140
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The bioconductor.org main website will be down for a brief period for maintenance. Starting approximately 7:45 am EST. Should be back up around 8:00 …
infrastructure
8.2 years ago gregory.wargula ▴ 30
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Bioconductor 2.6 is released
Sequencing Microarray Visualization Infrastructure PROcess beadarray keggorthology eisa
updated 8.6 years ago by • 0 • written 15.0 years ago by ★ 1.6k
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News: BioCAsia, 4th November 2016, Brisbane, Australia
conference transcription epigenomics visualization infrastructure News
8.7 years ago Matthew Ritchie ▴ 1000
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News: BioCAsia, 8 Sept 2015, Tokyo
sequencing transcription epigenomics visualization infrastructure News
9.8 years ago • updated 9.7 years ago Matthew Ritchie ▴ 1000
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5
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Running the GSEA algorithm
Infrastructure PGSEA GSEABase SeqGSEA Infrastructure PGSEA GSEABase SeqGSEA
updated 11.0 years ago by ★ 1.3k • written 11.0 years ago by ▴ 680
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job: head of core facility bioinformatics (Mainz/Germany)
Epigenetics Infrastructure Epigenetics Infrastructure
11.3 years ago Holger Klein ▴ 20
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Bioinformatics Facility Director Position at UC Riverside
Proteomics Infrastructure Proteomics Infrastructure
11.5 years ago Thomas Girke ★ 1.7k
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1.3k
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Reopening of Computational Biologist position at Genentech
Infrastructure PROcess Infrastructure PROcess
11.7 years ago Michael Lawrence ★ 11k
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*Ranges paper published
Infrastructure IRanges GenomicFeatures GenomicRanges Infrastructure IRanges GenomicFeatures
updated 11.7 years ago by ★ 4.2k • written 11.7 years ago by ★ 11k
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DexSeq extracols option
RNASeq Microarray Genetics Annotation Normalization Infrastructure Cancer probe limma
updated 11.7 years ago by ★ 1.9k • written 11.7 years ago by ▴ 40
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convert IDs in a data frame?
GO Infrastructure Cancer GO Infrastructure Cancer
updated 11.7 years ago by ★ 7.2k • written 11.7 years ago by 16k
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Finding mismatches between reads and reference sequence
Infrastructure Cancer BSgenome BSgenome Infrastructure Cancer BSgenome BSgenome
updated 12.0 years ago by ▴ 30 • written 12.0 years ago by 16k
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Bioconductor Digest, Vol 121, Issue 29
miRNA Annotation Normalization Visualization Clustering Infrastructure Cancer BSgenome vsn
12.0 years ago Matthew Thornton ▴ 380
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2
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2.9k
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[R] Error in setMethod("combine"... was - Error when installing globaltest package
Infrastructure Cancer Biobase tkWidgets globaltest BiocInstaller BiocGenerics Cancer
updated 12.0 years ago by 25k • written 12.0 years ago by ▴ 40
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Job: Bioinformatician (postdoc, indefinite) Pirbright Institute
Infrastructure Infrastructure
12.0 years ago Jan T Kim ▴ 50
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10
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2.8k
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assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Microarray Annotation GO Network Regression Survival Infrastructure Escherichia coli ROC
12.1 years ago Julie Zhu ★ 4.3k
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1.9k
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GSEABase error parsing msigdb_v3.1.xml
GO Infrastructure hgu95av2 Biobase annotate graph Category AnnotationDbi BiocGenerics GO
updated 12.2 years ago by 25k • written 12.2 years ago by ▴ 80
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Open computational biologist position at Genentech
Infrastructure Infrastructure
12.2 years ago Michael Lawrence ★ 11k
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1.3k
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Bioinformatics Position Opening
Proteomics Infrastructure Proteomics Infrastructure
12.2 years ago Thomas Girke ★ 1.7k
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1.8k
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Bioinformatician Job at Pirbright Institute
Genetics Infrastructure Genetics Infrastructure
12.3 years ago Jan T Kim ▴ 50
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5
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1.3k
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pooling for parallel hierarchical operations
Infrastructure Infrastructure
updated 12.4 years ago by 25k • written 12.4 years ago by ★ 11k
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2
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counting RNA-seq reads in R/BioC
GO Infrastructure Rsubread easyRNASeq GO Infrastructure Rsubread easyRNASeq
updated 12.6 years ago by ★ 6.8k • written 12.6 years ago by ▴ 880
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good news and bad news
Infrastructure Cancer IRanges GenomicRanges Infrastructure Cancer IRanges GenomicRanges
updated 12.6 years ago by ★ 13k • written 12.6 years ago by 16k
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Bioinformatics Academic Coordinator Job Posting
Proteomics Infrastructure Proteomics Infrastructure
12.7 years ago Guest User ★ 13k
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2012 Bioconductor European Developers' Workshop - annoucement
Proteomics Infrastructure Proteomics Infrastructure
12.8 years ago Mark Robinson ▴ 880
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Open Position - Academic Coordinator for Bioinformatics
Proteomics Infrastructure Proteomics Infrastructure
13.0 years ago Thomas Girke ★ 1.7k
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2 more Job Announcements
Genetics Infrastructure Genetics Infrastructure
13.1 years ago Jenny Drnevich ★ 2.0k
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[Job] Bioinformatician-NGS (Vienna, Austria)
Sequencing Infrastructure Sequencing Infrastructure
13.3 years ago Ido M. Tamir ▴ 150
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"internal equal" overlap mode for GRangesList
Infrastructure Infrastructure
updated 13.4 years ago by ★ 1.6k • written 13.4 years ago by ★ 11k
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illuminaHumanv4 mappings
Infrastructure Cancer Homo sapiens probe AnnotationDbi ASSIGN Infrastructure Cancer probe
13.5 years ago Mark Cowley ▴ 910
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1.7k
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GGtools and GGBase installation problems
Infrastructure GUI Ruuid GGtools GGBase Infrastructure GUI Ruuid GGtools GGBase
updated 14.1 years ago by 6.7k • written 14.1 years ago by ▴ 460
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A code kata: evening-out *Ranges ends.
Infrastructure Cancer IRanges Infrastructure Cancer IRanges
14.6 years ago Steve Lianoglou ★ 13k
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958
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NOTE: bioconductor.org system maintenance; planned downtime 12pm-1pm PDT Friday 9/18
Infrastructure Infrastructure
15.6 years ago Patrick Aboyoun ★ 1.6k
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Research positions available in neuroproteomics
Proteomics Infrastructure Proteomics Infrastructure
16.1 years ago Abhilash Venu ▴ 340
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1.5k
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GSEA to discover co-regulated genes
Transcription Annotation Pathways Infrastructure probe convert GSEABase Transcription
16.2 years ago Paul Geeleher ★ 1.3k
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997
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Project Enquiry!
Infrastructure Infrastructure
16.6 years ago Kat ▴ 20
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1.1k
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Staff Position at EBI: Computational Scientist / Bioconductor
Infrastructure Infrastructure
16.6 years ago Wolfgang Huber ★ 13k
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1.6k
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GSEABase error in parsing msigdb_v2.5.xml
GO Infrastructure hgu95av2 Biobase Ruuid AnnotationDbi GO Infrastructure hgu95av2 Biobase
updated 16.9 years ago by 25k • written 16.9 years ago by ▴ 130
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Affymetrix Human Gene 1.0 ST Array
Infrastructure cdf probe affy Infrastructure cdf probe affy
16.9 years ago Hans-Ulrich Klein ▴ 330
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1.5k
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BioC 2.2 now available
SNP Microarray Genetics Annotation Preprocessing Bayesian Clustering Infrastructure Cancer
updated 16.9 years ago by ★ 1.6k • written 16.9 years ago by 25k
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To biomaRt users: Major downtime March 7th 4pm - March 8th 6pm
Infrastructure biomaRt Infrastructure biomaRt
17.1 years ago Steffen ▴ 500
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biocep project - R for the Web and the Virtual R Workbench
Infrastructure PROcess Infrastructure PROcess
17.4 years ago kchine@ebi.ac.uk ▴ 10
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question regarding lumiHumanV1SUMFUNC and lumiRatV1SUMFUNC in lumiHumanV1 and lumiRatV1, respectively
Annotation Infrastructure Cancer Annotation Infrastructure Cancer
17.6 years ago Seth Falcon ★ 7.4k
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2x2 factorial with dye effect, limma design
Microarray Infrastructure Microarray Infrastructure
18.2 years ago Gordon Smyth 52k
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1.5k
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BioC 1.9 is released!
BiocViews SNP Microarray Annotation Normalization Visualization Network Infrastructure SNP
18.5 years ago Seth Falcon ★ 7.4k
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1
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1.3k
views
Newbie 'rflowcyt' question; problem loading facscan256.fcs
Survival Infrastructure Cancer hexbin prada rfcdmin rflowcyt Survival Infrastructure
updated 18.9 years ago by ★ 7.4k • written 18.9 years ago by ▴ 80
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5
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extracting interactions between members of the KEGG pathways
Pathways Infrastructure Cancer graph Pathways Infrastructure Cancer graph
updated 19.1 years ago by ★ 5.5k • written 19.1 years ago by ▴ 90
50 results • Page 1 of 1
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Comment: compute_fasta_digest does not match Salmon index hash by Alex • 0
I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…
Comment: Question on displaying color photo as Greyscale in EBImage by Albert • 0
great and very nice
Comment: European Bioconductor Conference 2023 planning by Pandora • 0
The [Tag Game][1] is not just a simple chase; it involves strategy and tactics as players must think quickly to avoid being tagged. Various…
Comment: Generalized edgeR functions by bukarimanches • 0
I have estimated the new parameter set, it doesn't seem as useful as I thought [geometry dash lite][1] [1]: https://geometry-lite.com/
Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by Morse • 0
[Geometry Dash Lite][1] is the free version of the famous Geometry Dash series. It was made by RobTop Games and lets players enjoy the thri…
Votes
Two EPIC Methylation Array Analysis Questions
How to get DMR for Infinium methylation EPIC v2
A: GEOquery Fails to Download Series Matrix File
Comment: Gene IDs conversion between Ensembl and NCBI nomenclature for non-model species
what the test method for enrichGO in clusterProfiler?
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