Showing : impute • reset
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Message 'invalid data format' on impute.MAR function
impute
5 months ago marcosdossantosferreira • 0
0
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3
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534
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impute.knn produces different results based on matrix order
impute
updated 8 months ago by 67k • written 8 months ago by • 0
1
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2
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826
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Impute does not work
impute
8 months ago Laura • 0
1
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4
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6.8k
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Error loading impute(): '/usr/lib/libgfortran.5.dylib' (no such file)
Install impute
updated 18 months ago by • 0 • written 2.8 years ago by • 0
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0
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964
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Introduction to DEP - data imputation
DEP impute
3.2 years ago catherine.li • 0
0
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1
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2.0k
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Removing batch effect by sva or combat and subsequent correlation analysis by WGCNA
WGCNA impute sva
updated 3.5 years ago by ▴ 50 • written 3.5 years ago by • 0
2
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3
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2.5k
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Imputation method selection (mass spectrometry) bimodal distribution
impute missing value imputation DEP massspectrometry
updated 6.9 years ago by 1.6k • written 6.9 years ago by ▴ 60
2
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3
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1.8k
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champ.impute doesn't update beta matrix
champ impute bioconductor
updated 7.6 years ago by ▴ 90 • written 7.6 years ago by ▴ 10
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0
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1.2k
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Bugs for impute package
bugs impute
8.2 years ago Shicheng Guo • 0
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1.6k
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Possible methodologies for missing value imputation of continuous variables in a data frame in R
missing data missing value imputation impute MICE bioconductor
9.1 years ago svlachavas ▴ 830
1
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5
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3.2k
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Using Limma for proteomics (2D DIGE) datasets
Proteomics limma impute limmaGUI Proteomics limma impute limmaGUI
updated 9.4 years ago by • 0 • written 15.1 years ago by ▴ 60
1
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5
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1.9k
views
Linear model after imputation (impute.knn function)
impute
updated 9.4 years ago by 51k • written 9.4 years ago by ▴ 10
0
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3
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3.8k
views
Error installing impute package
GUI impute DNAcopy GUI impute DNAcopy
updated 10.4 years ago by ★ 8.2k • written 10.4 years ago by ▴ 80
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2
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1.5k
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Tigre Package question 3
Microarray impute PROcess convert mmgmos puma tigre trigger Microarray impute PROcess
updated 10.7 years ago by ▴ 60 • written 10.7 years ago by ▴ 50
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FW: Tigre Package question 3
impute PROcess mmgmos puma impute PROcess mmgmos puma
10.7 years ago Solanki, Anisha ▴ 60
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2.2k
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sva/ComBat with missing values?
impute impute
11.1 years ago W. Evan Johnson ▴ 860
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3
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1.5k
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Error installing (some) Bioconductor packages on Mac OSX under R-3.0.0?
GUI impute DNAcopy GUI impute DNAcopy
updated 11.6 years ago by ★ 8.2k • written 11.6 years ago by ★ 3.0k
0
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3
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3.2k
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Error installing impute package
impute impute
updated 11.6 years ago by ▴ 870 • written 11.6 years ago by ★ 3.0k
0
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1
reply
2.1k
views
impute package
impute impute
updated 12.1 years ago by 25k • written 12.1 years ago by ▴ 10
0
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1
reply
3.2k
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Error using impute.knn function
Microarray Normalization impute Microarray Normalization impute
12.3 years ago Peter Davidsen ▴ 210
0
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2
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1.6k
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Error when using impute to get missing values
impute ArrayExpress impute ArrayExpress
updated 12.6 years ago by ★ 4.2k • written 12.6 years ago by ▴ 10
0
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1
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1.4k
views
impute.knn
impute impute
updated 12.7 years ago by ★ 4.2k • written 12.7 years ago by ▴ 290
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2
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6.3k
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impute package
impute BiocInstaller impute BiocInstaller
updated 12.7 years ago by 25k • written 12.7 years ago by ▴ 10
0
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1
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1.5k
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CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 13.0 years ago by ▴ 430 • written 13.0 years ago by ▴ 10
0
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4
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2.3k
views
How is fold change reported in the samr output?
siggenes impute siggenes impute
updated 14.2 years ago by 67k • written 14.2 years ago by ▴ 20
0
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0
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1.2k
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DNAcopy
aCGH impute DNAcopy aCGH snapCGH CGHcall aCGH impute DNAcopy aCGH snapCGH CGHcall
14.8 years ago Daniel Rico ▴ 110
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1.0k
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pcaMethods and categorical NAs
impute impute
14.8 years ago Antoni Picornell ▴ 40
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2
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2.5k
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Genotype imputation
impute impute
updated 15.0 years ago by ▴ 270 • written 15.0 years ago by ▴ 40
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2
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1.5k
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A list, a matrix and impute.knn for making data for SAMR
Microarray impute Microarray impute
updated 15.2 years ago by ▴ 60 • written 15.2 years ago by ▴ 90
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2
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1.3k
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How to display chromosome rapresentation ?
CGH impute CGH impute
updated 15.6 years ago by 21k • written 15.6 years ago by ▴ 540
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0
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1.8k
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when to impute the missing value?
impute pcaMethods impute pcaMethods
17.0 years ago De-Jian ZHAO ▴ 240
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1
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1.2k
views
Analysis of many Flagged spots
limma impute limma impute
updated 17.2 years ago by ▴ 40 • written 17.2 years ago by ★ 1.9k
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1
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1.4k
views
Imputation problem in aCGH
aCGH Biobase multtest impute aCGH aCGH Biobase multtest impute aCGH
17.3 years ago Benjamin Otto ▴ 830
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0
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1.1k
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verification
GO limma impute oligo makePlatformDesign crlmm GO limma impute oligo makePlatformDesign
17.7 years ago Vasiliki Xiarchou ▴ 10
0
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3
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1.2k
views
Unable to compile the impute package on debian with gcc 4.1
Cancer impute Cancer impute
updated 17.7 years ago by ▴ 60 • written 17.7 years ago by ★ 7.4k
0
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0
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1.1k
views
Unable to compile the impute package on debian with gcc 4.1
impute impute
17.7 years ago Sebastian Bauer ▴ 60
0
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2
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1.3k
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imputing missing data for 70mer array platform, need advice
aCGH CGH multtest impute aCGH oligo aCGH CGH multtest impute aCGH oligo
updated 17.8 years ago by 21k • written 17.8 years ago by ▴ 50
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0
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1.2k
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aCGH
aCGH CGH impute aCGH aCGH CGH impute aCGH
18.0 years ago Sean Davis 21k
0
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2
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1.8k
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knn.imput and prcomp error
Microarray impute Microarray impute
updated 18.1 years ago by 67k • written 18.1 years ago by ▴ 30
0
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0
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1.1k
views
Re: Re: segmentation error in pamr.knnimpute
pamr impute pamr impute
19.5 years ago Alice Le Bars ▴ 40
0
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1
reply
2.0k
views
problem with impute.knn in the impute package
Clustering impute Clustering impute
updated 19.5 years ago by ▴ 360 • written 19.5 years ago by ▴ 150
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0
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1.3k
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problem with impute.knn in the impute package
Clustering impute Clustering impute
19.5 years ago He, Yiwen NIH/CIT ▴ 360
0
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0
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1.4k
views
Problems with aCGH package
aCGH Genetics Cancer CGH impute aCGH aCGH Genetics Cancer CGH impute aCGH
20.4 years ago grischa tödt ▴ 30
0
votes
3
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1.5k
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Recent changes to Bioconductor packages
reposTools graph Rgraphviz simpleaffy impute reposTools graph Rgraphviz simpleaffy impute
20.8 years ago • updated 20.7 years ago madman@jimmy.harvard.edu ▴ 850
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2
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1.3k
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Handling Missing Values
impute impute
updated 22.0 years ago by ★ 1.0k • written 22.0 years ago by ▴ 110
45 results • Page 1 of 1
Recent ...
Replies
Answer: Combining RNAseq and microarray data using edgeR/limma-voom by Gordon Smyth 51k
I agree with James, although I tend to combine analyses using geneset tests rather than by meta analysis tools like GeneMeta. > My questio…
Comment: Adjusted p-values become NA when sub-setting samples by txema.heredia • 0
Thanks! I've been looking into DESeq2's code and, indeed, I get matching results when running manually the code inherited from the `genefi…
Answer: DESeq2 interaction between cancer cells and microenvironment cells by Michael Love 42k
I don't really know what you mean by "come from the contamination". You can look at the main effects and the interaction, but I don't know …
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Fahd • 0
Thanks for looking into this. This issue results in the incorrect usage of multiple ORA software including EnrichR.
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k
Yes, I understand the implications of replacing the `OrgDb` packages in release. Maybe an upload to the annotationHub or GitHub could be an…
Votes
A: p.adjust BH generates duplicate values
Answer: Adjusted p-values become NA when sub-setting samples
Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice
Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim
A: How does edgeR cpm function calculate log(CPM) values?
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