Bioconductor Import

Showing : import • reset

votes

replies

2.5k

views

R GillespieColin ArrayExpress import TimeSeriesExperiment

updated 18 months ago by jacorvar ▴ 40 • written 2.5 years ago by eraldagjika ▴ 20

votes

978

views

.gpr raw Agilent MicroarrayData import

updated 3.4 years ago by Gordon Smyth 52k • written 3.4 years ago by irina.st.louis4 • 0

votes

replies

1.8k

views

import

3.8 years ago Ofelia • 0

votes

replies

2.3k

views

software error BigWig import windows

5.0 years ago lsilva.m • 0

vote

replies

1.0k

views

ddCt import analysis R qRTPCR

updated 5.6 years ago by Zhang, Jitao David ▴ 120 • written 5.6 years ago by mohammedtoufiq91 ▴ 10

votes

replies

1.8k

views

rtracklayer fasta import Biostrings

updated 6.2 years ago by Michael Lawrence ★ 11k • written 6.2 years ago by k.vitting.seerup ▴ 120

votes

replies

3.7k

views

bigwig rtracklayer import granges grangeslist

updated 7.7 years ago by Michael Lawrence ★ 11k • written 7.7 years ago by Assa Yeroslaviz ★ 1.5k

votes

replies

1.4k

views

rtracklayer gff gtf import import.gff3

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by Marlin ▴ 20

votes

1.4k

views

rtracklayer bigwig import

updated 8.4 years ago by Michael Lawrence ★ 11k • written 8.4 years ago by zx8754 ▴ 10

votes

replies

2.8k

views

rtracklayer import bed files

9.0 years ago jmr • 0

vote

replies

3.2k

views

rtracklayer import bed

updated 9.1 years ago by Michael Lawrence ★ 11k • written 9.1 years ago by Peter Hickey ▴ 750

11 results • Page 1 of 1

Recent ...

Replies

Answer: WGCNA by ATpoint ★ 4.8k

> I would like to ask whether it would make sense to first normalize the count data using DESeq2 and VST before performing WGCNA. This …

Answer: cannot download atena annotation for human by Robert Castelo ★ 3.4k

Hi, sorry for the delay in getting back to you, probably by now you found the solution yourself, but just in case you didn't or anybody els…

Answer: Comparison of results obtained from a subset of the data versus the complete dat by swbarnes2 ★ 1.4k

In general, using the entire dataset and then just comparing the subgroups you want within the whole dataset is preferable.

Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Answer: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

Votes

Answer: Origin of the labels for the SingleCellMultiModal dataset

Answer: PhD scholar

Answer: how to use `arrayWeightsQuick()`?

Having Trouble Using CNE12() and CNE21() in CNEr

Awards • All

Scholar to ATpoint ★ 4.8k