Bioconductor Illumina450k

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2.6k

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microarray minfi methylumi illumina450k

8.3 years ago • updated 7.4 years ago poojitha.stemcell ▴ 10

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1.7k

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minfi illumina illumina450k methylation R

7.7 years ago ezrabekele17 • 0

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1.9k

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champ methylation illuminahumanmethylation450k.db illumina450k

updated 8.3 years ago by Yuan Tian ▴ 90 • written 8.3 years ago by hrishi27n ▴ 20

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2.2k

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limma illumina450k lmfit

updated 8.3 years ago by Ryan C. Thompson ★ 7.9k • written 8.3 years ago by DSP • 0

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1.2k

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minfi methylation illumina450k

8.3 years ago hrishi27n ▴ 20

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2.6k

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minfi illumina450k methylation

8.3 years ago hrishi27n ▴ 20

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2.3k

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ENmix combat.mc illumina450k combat sva

8.7 years ago DSP • 0

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1.3k

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minfi bumphunter DNA methylation illumina450k

updated 8.7 years ago by James W. MacDonald 68k • written 8.7 years ago by fleur_p90 • 0

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1.5k

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ChAMP methylation illumina450k

8.8 years ago Daniel E. Weeks ▴ 30

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951

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illumina450k methylation

8.9 years ago niutster • 0

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3.6k

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illumina450k limma lme4 lmer

updated 8.9 years ago by Aaron Lun ★ 28k • written 8.9 years ago by DSP • 0

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1.7k

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minfi software error methylation illumina450k

updated 22 months ago by kuzn.di • 0 • written 9.2 years ago by pm2015 • 0

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1.3k

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minfi software error methylation illumina450k

9.2 years ago pm2015 • 0

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1.9k

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rnbeads illumina450k

updated 9.4 years ago by pavlo.lutsik ▴ 10 • written 9.4 years ago by Brian Smith ▴ 120

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

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Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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