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gzip
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reset
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1.9k
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How to open up a zip file?
zip
gzip
2.7 years ago
ksci
▴ 20
1
vote
2
replies
1.1k
views
Working with compressed fasta files?
files
gzip
5.0 years ago
psschlogl
• 0
0
votes
1
reply
1.9k
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bug limma / illuminaio? Otherwise small feature request...
limma
illuminaio
idat
gzip
updated 7.6 years ago by
Matthew Ritchie
▴ 1000 • written 7.6 years ago by
Guido Hooiveld
★ 4.1k
2
votes
1
reply
1.8k
views
export BSgenome directly in gzipped fasta
bsgenome
gzip
fasta
updated 8.7 years ago by
Jeff Johnston
▴ 90 • written 8.7 years ago by
TimothéeFlutre
▴ 80
4 results • Page
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Comment: EuroBioC2024 abstract submission is open!
by
Alan Downey
• 0
EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix
by
O'Brien
• 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts
by
O'Brien
• 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Comment: Packages don't update, but no error or warning is thrown
by
neighsanlo
• 0
This is useful information.
Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
by
freemanmclaughlin9969289
• 0
Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…
Votes
A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
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