Bioconductor Graphviz

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Graphviz Rgraphviz

3.3 years ago c.bell.lu • 0

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pathview bioconductor graphics graphviz Pathview

updated 8.5 years ago by dondelelcaro ▴ 10 • written 8.6 years ago by guillermo.marco ▴ 30

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Pathview rgraphviz graphviz KEGG

updated 8.6 years ago by Luo Weijun ★ 1.6k • written 8.6 years ago by guillermo.marco ▴ 30

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r rstudio rgraphviz graphviz .dot

8.8 years ago pleaseteachmehowtodoit • 0

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pathview r pdf kegg graphviz

updated 9.3 years ago by Luo Weijun ★ 1.6k • written 9.3 years ago by firstdayonthejob2003 • 0

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pathview clusterProfiler KEGGpath visualization Graphviz

updated 9.4 years ago by Luo Weijun ★ 1.6k • written 9.4 years ago by svlachavas ▴ 840

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rgraphviz graphviz R

9.8 years ago oliverfrings • 0

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Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Comment: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

Answer: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

Yes, that is the correct way to use `arrayWeightsQuick`. Thanks for pointing out that there is still a reference to `arrayWeightsSimple` i…

Answer: fast apply on RleList by story.benjamin ▴ 20

solved with viewApply (code is simplified below) + map reduce on chrs test.split <- split(test.gr,seqnames(test.gr)) final.st…

Comment: fast apply on RleList by story.benjamin ▴ 20

Hi James, thanks for the reply. I ultimately figured it out ... viewApply showed a massive speed increase for me (see other answer) - I was…

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Having Trouble Using CNE12() and CNE21() in CNEr

Answer: Having Trouble Using CNE12() and CNE21() in CNEr

annotation EpicV2

Answer: fast apply on RleList

Answer: BiocParallel_1.40.1.tar.gz not available

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Popular Question to Ariel Chernomoretz ▴ 170