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grange
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0
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751
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Error in Medips MEDIPS.CpGenrich()
software error
Grange
RangedData
5.1 years ago
mawusse.agbessi
• 0
2
votes
0
replies
994
views
SOLVED. finding distance to nearest neighbour (non-self) within a list in GenomicRanges
GenomicRanges
GenomicFeatures
grange
distanceToNearest
R
5.5 years ago
rmash
▴ 20
0
votes
1
reply
779
views
Multi-sample Heatmap from GRange
GRange
updated 6.4 years ago by
James W. MacDonald
68k • written 6.4 years ago by
Danny
• 0
0
votes
3
replies
3.1k
views
Selecting columns form a list of grange objects
r
granges
grange
6.6 years ago
g.k
• 0
1
vote
3
replies
1.3k
views
GRange and bam files
bioconductor
Grange
7.0 years ago
Merlin
▴ 10
0
votes
1
reply
1.2k
views
Detect Sites with Minimum Gap in GRanges Object
R
genomicranges
granges
grange
7.0 years ago
g.k
• 0
1
vote
2
replies
2.1k
views
Detecting Overlaps within Grange Object
r
grange
granges
iranges
updated 7.1 years ago by
Michael Lawrence
★ 11k • written 7.1 years ago by
g.k
• 0
3
votes
4
replies
6.0k
views
GenomicRanges: Take union of GRanges and keep metadata?
GRange
genomicranges
updated 8.6 years ago by
Martin Morgan
25k • written 8.6 years ago by
endrebak85
▴ 40
1
vote
2
replies
2.8k
views
Extract GRanges for gene data frame
GRange
updated 8.7 years ago by
Martin Morgan
25k • written 8.7 years ago by
mdeea123
▴ 10
9
votes
21
replies
13k
views
annotate GRanges with upstream or downstream nearest gene
GRange
genomicranges
genomicfeatures
updated 9.3 years ago by
Ou, Jianhong
★ 1.3k • written 9.3 years ago by
tangming2005
▴ 200
0
votes
1
reply
1.2k
views
summarizeOverlaps on partial BAM file?
GenomicFeatures
GRange
Rsamtools
updated 10.2 years ago by
Valerie Obenchain
★ 6.8k • written 10.2 years ago by
cidster12
• 0
4
votes
2
replies
1.5k
views
about INCLUSIVE INTERSECTION of GRANGES
Grange
10.4 years ago
Bogdan
▴ 670
12 results • Page
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cold.wolverine.arku
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That's a great use case of DESeq2! Even though it's not specifically tailored for TnSeq data, your approach to normalize and run explorator…
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So if I have understood what you have said : If i want to see if Day (time) has an effect / is being tested - then the reduced model should…
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52k
The p-values from `mroast` will be the same (up to sampling variability associated with random rotations) regardless of whether you test al…
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