Showing : goTools • reset
2
votes
5
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649
views
How to retrieve gene ontology GO class from gene list?
GO.db goTools
updated 9 months ago by 68k • written 9 months ago by • 0
0
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0
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950
views
Functional enrichment analysis for genomic data from non-model organism annotated based on model organism
DOSE hypeR goTools GOstats topGO
4.2 years ago Madza Farias-Virgens • 0
0
votes
2
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2.0k
views
goTools: Error in goidvect[test] : invalid subscript type \'list\'
Transcription Microarray Annotation GO goTools Transcription Microarray Annotation GO
updated 12.6 years ago by 68k • written 12.6 years ago by ★ 13k
0
votes
3
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5.7k
views
how to get gene list for given GO terms?
Pathways GO Cancer PROcess goTools genomes Pathways GO Cancer PROcess goTools genomes
updated 2.6 years ago by • 0 • written 12.9 years ago by ★ 7.2k
0
votes
9
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2.2k
views
ontoCompare (goTools) : goidvect error
GO goTools GO goTools
13.5 years ago Oana VIGY ▴ 80
0
votes
2
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2.2k
views
help in downloading some packages.
goTools sigPathway topGO goTools sigPathway topGO
updated 14.3 years ago by ▴ 550 • written 14.3 years ago by ▴ 100
0
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972
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goTools question
probe goTools probe goTools
14.4 years ago Pete Shepard ▴ 240
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1.2k
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obtaining GOID from nuID
GO goTools lumi GO goTools lumi
15.1 years ago Md.Mamunur Rashid ▴ 260
0
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1
reply
1.2k
views
question about ontoCompare() performance change
Transcription GO hgu133a goTools Transcription GO hgu133a goTools
updated 15.3 years ago by ★ 7.4k • written 15.3 years ago by ▴ 50
0
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0
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885
views
question about ontoCompare() performance change
GO PROcess goTools GO PROcess goTools
15.5 years ago Oana VIGY ▴ 80
0
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1
reply
1.3k
views
(no subject)
Pathways Clustering goTools GOstats Pathways Clustering goTools GOstats
updated 15.6 years ago by ▴ 270 • written 15.6 years ago by ▴ 300
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1
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1.3k
views
question about ontoCompare() performance change
Transcription GO hgu133a goTools Transcription GO hgu133a goTools
updated 15.6 years ago by ▴ 60 • written 15.7 years ago by ▴ 50
0
votes
4
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1.8k
views
error with ontoCompare (goTools)
GO hgu133a graph goTools GO hgu133a graph goTools
updated 16.1 years ago by ▴ 90 • written 16.1 years ago by ▴ 160
0
votes
2
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1.4k
views
using GSEAlm with GO geneSetCollections
GO affy goTools Category GSEABase GSEAlm GO affy goTools Category GSEABase GSEAlm
updated 16.2 years ago by ▴ 90 • written 16.2 years ago by ▴ 830
0
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0
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909
views
goTools package - extract genes
GO probe goTools GO probe goTools
16.7 years ago Anne Dirks Højfeldt / Region Nordjylland ▴ 10
0
votes
1
reply
1.1k
views
Reporting results of HyperGTest
GO goTools GO goTools
updated 16.8 years ago by ▴ 20 • written 16.8 years ago by ▴ 320
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1
reply
1.2k
views
Arabidopsis GO Pie Charts
goTools Category goTools Category
17.3 years ago Naomi Altman ★ 6.0k
0
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4
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2.3k
views
disagreement between biomaRt and topGO
GO hgu133plus2 annotate geneplotter graph Rgraphviz PROcess goTools biomaRt Category GO
updated 17.4 years ago by ▴ 500 • written 17.4 years ago by ★ 1.4k
0
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3
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1.5k
views
GO terms not found in goTools and GO
GO Biobase annotate goTools biomaRt GO Biobase annotate goTools biomaRt
updated 17.6 years ago by ★ 7.4k • written 17.6 years ago by ▴ 80
0
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0
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1.2k
views
Problem with customised endnode list in ontoCompare(goToolspackage)
Microarray GO graph goTools Category oligo Microarray GO graph goTools Category oligo
17.8 years ago Paquet, Agnes ▴ 500
0
votes
0
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1.1k
views
question about the value retured by function ontoCompare()
GO hgu133a probe PROcess goTools oligo GO hgu133a probe PROcess goTools oligo
18.0 years ago Paquet, Agnes ▴ 500
0
votes
1
reply
1.0k
views
problems with library goCluster
GO goTools GOstats goCluster GO goTools GOstats goCluster
updated 18.0 years ago by 68k • written 18.0 years ago by ▴ 40
0
votes
1
reply
1.0k
views
Using ontoCompare with local GO database
GO goTools GO goTools
updated 18.1 years ago by ▴ 500 • written 18.1 years ago by ▴ 100
0
votes
1
reply
1.2k
views
goTools problem
goTools oligo goTools oligo
updated 18.1 years ago by ▴ 500 • written 18.1 years ago by ▴ 30
0
votes
1
reply
1.4k
views
GO annotation/analysis for ath1121501
Annotation GO ath1121501 goTools GOstats biomaRt Annotation GO ath1121501 goTools
updated 18.5 years ago by ▴ 870 • written 18.5 years ago by ▴ 340
0
votes
12
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2.4k
views
Quick start to linking GO terms and microarray data
Microarray GO affy PROcess goTools GOstats Microarray GO affy PROcess goTools GOstats
19.0 years ago michael watson IAH-C ★ 3.4k
0
votes
2
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1.2k
views
GO Tools
GO goTools GO goTools
19.8 years ago Paquet, Agnes ▴ 500
0
votes
0
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1.0k
views
GO Tools
goTools goTools
19.8 years ago Mayte Suarez-Farinas ▴ 300
0
votes
1
reply
1.1k
views
annotation packages and goTools
Annotation moe430a moe430b goTools Annotation moe430a moe430b goTools
updated 20.0 years ago by ★ 2.9k • written 20.0 years ago by ▴ 300
0
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2
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1.3k
views
goTools and plot and go group names
GO graph goTools GO graph goTools
updated 20.5 years ago by ▴ 500 • written 20.5 years ago by ▴ 320
0
votes
1
reply
1.5k
views
GOtools: argument is of length zero
goTools goTools
updated 20.5 years ago by ▴ 500 • written 20.5 years ago by ▴ 320
31 results • Page 1 of 1
Recent ...
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Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0
how you did it pls explain
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k
If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…
Votes
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
Comment: Unused arguments error without used arguments in GSVA?
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