Bioconductor Genes

Showing : genes • reset

votes

replies

653

views

DESeq2 genes Differential expressed

18 months ago Syed Zaheer ▴ 10

votes

1.2k

views

GeneSetEnrichment genes genetogo

updated 2.4 years ago by Basti ▴ 780 • written 2.4 years ago by Noy • 0

votes

756

views

R microRNA genes binding Site

5.3 years ago pengu447 • 0

votes

replies

1.5k

views

edger differential expression genes fold change

updated 5.4 years ago by Aaron Lun ★ 28k • written 5.4 years ago by ilovesuperheroes1993 • 0

vote

replies

855

views

deseq2 genes expression

updated 5.6 years ago by Michael Love 42k • written 5.6 years ago by UserAnonyme • 0

vote

1.3k

views

topGO significant enrichment genes IDs

5.8 years ago David ROUX ▴ 20

votes

1.1k

views

deseq2 variance genes

updated 7.0 years ago by Michael Love 42k • written 7.0 years ago by hs.lansdell ▴ 20

votes

replies

1.2k

views

cnv genes genomic ranges splitByOverlap

updated 7.6 years ago by Martin Morgan 25k • written 7.6 years ago by julrodr80 ▴ 30

votes

781

views

deseq2 genes

updated 8.3 years ago by Michael Love 42k • written 8.3 years ago by silviajserrano • 0

votes

replies

2.8k

views

deseq2 wald lrt genes significance

updated 8.4 years ago by Michael Love 42k • written 8.4 years ago by aziza ▴ 20

votes

2.6k

views

heatmap rownames genes

9.1 years ago johnlee.johnson • 0

votes

replies

1.4k

views

datasets genes gene expression

updated 9.2 years ago by Steve Lianoglou ★ 13k • written 9.2 years ago by vavecilla • 0

12 results • Page 1 of 1

Recent ...

Replies

Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by Ai • 0

Hi Gordon, Thank you so much for answering my question and confirming that this is expected! I will go ahead note this down. Sincerely, …

Answer: Annotation for EPICv2 by icecreamlover • 0

Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k

If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…

Votes

Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim

A: How does edgeR cpm function calculate log(CPM) values?

Answer: DecideTest vs topTAGs in edgeR

Comment: DESeq Input from Salmon + tximport/tximeta

Awards • All