Showing : flowWorkspace • reset
0
votes
3
replies
459
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How to combine multiple lists of cytoframes/cytocq data objects into one
flowWorkspace cytocq
updated 8 months ago by ▴ 360 • written 8 months ago by ▴ 30
0
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2
replies
585
views
arm64 Update to flowWorkspace (4.14.2)
flowWorkspace
13 months ago rgong1 • 0
1
vote
1
reply
685
views
FCS3.2 reading
flowWorkspace flowCore CytoML
updated 12 months ago by ▴ 360 • written 13 months ago by ▴ 30
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0
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1.0k
views
Job: Post-Doctoral Bioinformatics Research Scientist / Bioinformatician II
flowWorkspace CytoGLMM FlowSOM
3.4 years ago hbolouri • 0
0
votes
1
reply
1.3k
views
Getting a dataset that only contains the flow data within the gated area
flowWorkspace
updated 3.6 years ago by ★ 1.3k • written 3.6 years ago by • 0
0
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1
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2.0k
views
how to get MFI stats from data
flowCore flowStats flowUtils flowWorkspace
updated 3.6 years ago by ★ 1.3k • written 3.9 years ago by • 0
5
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4
replies
2.2k
views
ggcyto wrong axis scale?
ggcyto flowWorkspace flow cytometry flowjo
updated 4.9 years ago by ★ 4.0k • written 4.9 years ago by ▴ 10
4
votes
5
replies
1.6k
views
Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace flowCore openCyto flowFrame F-measure
updated 5.0 years ago by ▴ 310 • written 5.0 years ago by • 0
1
vote
1
reply
2.3k
views
uploading xml file in flowworkspace
flowworkspace xml R flowjo
updated 5.4 years ago by • 0 • written 8.0 years ago by ▴ 10
1
vote
3
replies
1.5k
views
Problem parsing data with parseWorkspace
flowWorkspace
5.5 years ago jokup101 • 0
3
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2
replies
1.3k
views
flowWorkspace cannot load external data
flowWorkspace external data flowCore
5.7 years ago Brent.OCarrigan • 0
1
vote
3
replies
1.6k
views
Cannot inverse transform GatingSet
flowworkspace flow cytometry flow workspace
updated 5.9 years ago by ▴ 310 • written 5.9 years ago by • 0
0
votes
1
reply
1.1k
views
How to get popStats from wsp
flowworkspace
updated 6.3 years ago by ★ 1.3k • written 6.3 years ago by ▴ 10
2
votes
3
replies
2.0k
views
FlowJo workspace cannot be parsed with flowworkspace
flowworkspace parseWorkspace parseWorkspace
updated 6.6 years ago by ★ 1.3k • written 6.6 years ago by ▴ 10
0
votes
4
replies
2.4k
views
Trying to plot MFI using Flowworkspace but parameters are transformed by 'flowjo_biexp'. How do I get untransformed values?
flowworkspace
updated 6.8 years ago by ★ 1.3k • written 6.8 years ago by • 0
1
vote
3
replies
1.9k
views
Unable to install flowWorkspace from github
flowWorkspace cytoutils
updated 7.1 years ago by 25k • written 7.1 years ago by ▴ 30
2
votes
5
replies
2.2k
views
How to find Geometric Mean from gated Quantibeads
flowworkspace opencyto
updated 7.7 years ago by ★ 1.3k • written 7.7 years ago by ▴ 10
0
votes
1
reply
926
views
How to adjust plotGate axis?
flowworkspace
7.7 years ago justinyi10 ▴ 10
0
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5
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1.8k
views
getIndices identifies non existing cells in a gate
flowworkspace getIndices
updated 8.1 years ago by ★ 1.3k • written 8.2 years ago by • 0
2
votes
5
replies
2.5k
views
Workflow highthroughputassays can't install properly
workflows flowcore flowstats flowworkspace
8.2 years ago kristoffer.haurum • 0
3
votes
0
replies
1.9k
views
An appeal to flow cytometry tools users
flow flowcore flowworkspace cytometry gating
8.2 years ago Greg Finak ▴ 240
0
votes
1
reply
1.3k
views
exporting bi-exponetially transformed data as CVS
flowWorkspace flowcore
updated 8.2 years ago by ★ 1.3k • written 8.2 years ago by ▴ 10
2
votes
4
replies
1.7k
views
Parsing flowWorkspace data
opencyto R flowworkspace bioconductor
updated 8.3 years ago by ★ 1.3k • written 8.3 years ago by • 0
0
votes
1
reply
2.7k
views
reading an ".xml" file as FlowJo Workspace file
opencyto gating opencyto flowcore flowworkspace
updated 8.9 years ago by ★ 1.3k • written 8.9 years ago by • 0
0
votes
2
replies
2.8k
views
OpenCyto -- proper gating of CD45
opencyto gating flowworkspace
updated 9.0 years ago by ★ 1.3k • written 9.0 years ago by ▴ 30
0
votes
2
replies
1.4k
views
on extend_val parameter in parseWorkspace
flowworkspace
updated 9.0 years ago by ★ 1.3k • written 9.0 years ago by ▴ 10
2
votes
1
reply
2.0k
views
Trouble parsing a workspace in flowWorkspace
flowworkspace opencyto
updated 9.0 years ago by ▴ 10 • written 9.0 years ago by ▴ 10
0
votes
1
reply
2.2k
views
FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
9.1 years ago Jiang, Mike ★ 1.3k
1
vote
9
replies
3.8k
views
Problem with ggcyto/flowWorkspace from GitHub
software error flowworkspace opencyto
9.3 years ago anders.tondell ▴ 30
1
vote
6
replies
2.0k
views
flowWorkspace: Crash when using getPopStats with format="wide"
flowworkspace
9.3 years ago Viktor Thiel • 0
0
votes
2
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1.7k
views
Exporting to FlowJo
flowworkspace
9.3 years ago hunjoong.lee • 0
1
vote
2
replies
1.5k
views
flowWorkspace doesn't allow channels that are named as subset (edit: substring) of other (PE-A and PE-Alexa Fluor 700-A eg.)
flowWorkspace
updated 9.3 years ago by ★ 1.3k • written 9.3 years ago by ▴ 10
1
vote
1
reply
1.8k
views
Understanding Flow cytometry data
flow cytometry flowcore flowclean rflowcyt flowworkspace
updated 9.4 years ago by ★ 1.3k • written 9.4 years ago by • 0
2
votes
2
replies
1.7k
views
Problem updating flowWorkspace -- error: unrecognized command line option "-ftemplate-depth=900"
flowWorkspace
updated 9.4 years ago by ★ 1.3k • written 9.4 years ago by • 0
0
votes
3
replies
1.6k
views
Displaying Negative data from flow cytometers
flowcore flowworkspace flowviz
updated 9.5 years ago by ★ 1.3k • written 9.5 years ago by • 0
0
votes
0
replies
1.7k
views
flowWorkspace and ggcyto
flowworkspace flow cytometry visualization
9.7 years ago Jiang, Mike ★ 1.3k
0
votes
0
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1.7k
views
On boolean combinations (flowWorkspace)
flowworkspace flow cytometry
9.9 years ago Jiang, Mike ★ 1.3k
2
votes
5
replies
1.8k
views
Memory problem using openWorkspace()
flowworkspace
10.5 years ago Silke Zachariae ▴ 30
0
votes
1
reply
1.5k
views
flowWorkspace transformation on FCS 3 data (Nikolas)
PROcess flowWorkspace PROcess flowWorkspace
updated 13.0 years ago by ▴ 30 • written 13.0 years ago by ▴ 240
0
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0
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1.5k
views
flowWorkspace transformation on FCS 3 data
PROcess flowWorkspace PROcess flowWorkspace
13.0 years ago Nikolas ▴ 30
40 results • Page 1 of 1
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Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks by Luca • 0
Thanks for your time on this, I have also never seen anything quite like this before neither. The only confounding variable I received in t…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks by ATpoint ★ 4.8k
If it was global changes then (in my head) why is there two populations of peaks (that to me indicates some sort of confouder) and also, if…
Comment: fast apply on RleList by story.benjamin ▴ 20
Here's a test data.set if you need: library(GenomicRanges) library(rtracklayer) # gr test test.gr <- GRanges(seqnames…
Answer: BiocParallel_1.40.1.tar.gz not available by shepherl 4.1k
Please try again. We have updated the BiocParallel package and BiocManager should work as expected (pulling 1.40.2 as source). The Landin…
Comment: BiocParallel_1.40.1.tar.gz not available by Johan • 0
Your approach works, but it implies manually rejecting the update of BiocParallel at each use of `BiocManager::install()`, which is pretty …
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Modelling gene program dynamics across time with {lemur}
A: DESeq2 one group vs multiple groups comparison in presence of batch effect
Comment: BiocParallel_1.40.1.tar.gz not available
Comment: BiocParallel_1.40.1.tar.gz not available
Limma outputs different results for same sample?
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