Bioconductor Featurecount

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538

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featureCount Rsubread HPC

16 months ago kthapa • 0

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1.6k

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DESeq2 FeatureCount

updated 2.4 years ago by ATpoint ★ 4.6k • written 2.4 years ago by Jiayi • 0

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879

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ExomeSeq featureCount

3.2 years ago adR ▴ 40

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2.0k

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featurecount rsubread GenomicAlignments

4.9 years ago Konstantinos Yeles ▴ 80

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3.2k

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dexseq rsubread featureCount software error

updated 5.2 years ago by Yang Liao ▴ 450 • written 5.2 years ago by seung.ho.steven.choi • 0

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2.3k

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featureCount rna-seq gene_id re_gene_id stringtie

updated 6.0 years ago by Wei Shi ★ 3.6k • written 6.0 years ago by IRAIA.MAIALEN • 0

6 results • Page 1 of 1

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Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0

how you did it pls explain

Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 67k

If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…

Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by a.alkema • 0

Oh, that's silly - thanks, will do!

Answer: Meffil: error in functional normalization function (Error in rg.to.mu(rg, probes by James W. MacDonald 67k

This support site is meant to provide support for Bioconductor packages, but `Meffil` is not part of Bioconductor. You could presumably con…

Comment: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

> It looks like the ssgseaParam function might not be passing the > correct parameters to GSVA::gsva() Apparently because of the extra com…

Votes

Comment: Unused arguments error without used arguments in GSVA?

Answer: Reducing and aggregating GRanges with gaps using plyranges

Answer: Find exact GRanges match keeping metadata columns

Answer: Unused arguments error without used arguments in GSVA?

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Scholar to Michael Love 43k

Popular Question to Malcolm Cook ★ 1.6k