Bioconductor FeatureCount

Showing : featureCount • reset

votes

replies

495

views

featureCount Rsubread HPC

15 months ago kthapa • 0

votes

replies

1.6k

views

DESeq2 FeatureCount

updated 2.3 years ago by ATpoint ★ 4.6k • written 2.3 years ago by Jiayi • 0

votes

854

views

ExomeSeq featureCount

3.1 years ago adR ▴ 40

votes

replies

2.0k

views

featurecount rsubread GenomicAlignments

4.8 years ago Konstantinos Yeles ▴ 80

votes

replies

3.1k

views

dexseq rsubread featureCount software error

updated 5.1 years ago by Yang Liao ▴ 450 • written 5.1 years ago by seung.ho.steven.choi • 0

votes

2.2k

views

featureCount rna-seq gene_id re_gene_id stringtie

updated 5.9 years ago by Wei Shi ★ 3.6k • written 5.9 years ago by IRAIA.MAIALEN • 0

6 results • Page 1 of 1

Recent ...

Replies

Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0

Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…

Answer: combining raw counts and estimated counts by O'Brien • 0

It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…

Comment: Packages don't update, but no error or warning is thrown by neighsanlo • 0

This is useful information.

Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by freemanmclaughlin9969289 • 0

Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…

Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0

Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…

Votes

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

Awards • All

Teacher to dsull ▴ 40