Bioconductor Fdrtool

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2.4k

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p-value FDR DEP

updated 3.6 years ago by António Miguel de Jesus Domingues ▴ 510 • written 4.1 years ago by Alexei Leliavski ▴ 60

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1.3k

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fdrtool

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by Paul • 0

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deseq2 fdrtool apeglm

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by Paul • 0

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deseq2 rnaseq sva fdrtool ihw

updated 4.9 years ago by Michael Love 43k • written 4.9 years ago by rihards.saksis • 0

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1.7k

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deseq2 mirna fdrtool

updated 5.9 years ago by Robert Castelo ★ 3.4k • written 5.9 years ago by L_K • 0

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deseq2 fdrtool

updated 6.1 years ago by Michael Love 43k • written 6.1 years ago by bioinfo • 0

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3.8k

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deseq2 rnaseq fdrtool

updated 6.3 years ago by Ryan C. Thompson ★ 7.9k • written 6.3 years ago by C T ▴ 140

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pvalue adjusted pvalue fdrtool

updated 6.9 years ago by Michael Love 43k • written 6.9 years ago by hele7 ▴ 20

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3.0k

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fdrtool deseq2

7.1 years ago rrcutler ▴ 70

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7.7k

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deseq2 rnaseq fdrtool dispersion

updated 7.2 years ago by Bernd Klaus ▴ 610 • written 7.2 years ago by rrcutler ▴ 70

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deseq2 fdrtool genomicalignments

updated 7.3 years ago by Michael Love 43k • written 7.3 years ago by jakob.petereit ▴ 20

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rnaseq deseq2 fdrtool differential gene expression

7.4 years ago tcalvo ▴ 100

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2.7k

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fdrtool p-value distribution

7.8 years ago j.bergenstrahle ▴ 90

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deseq2 FDR fdrtool

updated 7.9 years ago by Bernd Klaus ▴ 610 • written 7.9 years ago by deena ▴ 20

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1.8k

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deseq2 multiple factor design FDR fdrtool

updated 7.9 years ago by Michael Love 43k • written 7.9 years ago by marieke • 0

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3.9k

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deseq2 fdrtool

updated 8.6 years ago by Bernd Klaus ▴ 610 • written 8.6 years ago by dhibar ▴ 60

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2.4k

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deseq2 rnaseq contrast multiple comparisons fdrtool

8.7 years ago sebastiano.curreli • 0

17 results • Page 1 of 1

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Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Great thanks for posting the issue and sticking with it Annaleigh

Comment: Problems with oarfish + tximport + swish by brown.annaleigh • 0

Awesome possum! Update works!! Thank you so much for the help and guidance!

Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal by iqratechnology4 • 0

Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/

Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt? by James W. MacDonald 67k

> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…

Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Let me see if I can add some code to tximeta to cover this case. I've added an argument `skipRanges` in devel branch which should allow: …

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Answer: Error in download.file for TCGAutils::symbolsToRanges

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Answer: Limma Interaction Effect with Covariates

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