Bioconductor Exon array analysis

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1.1k

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pd.huex.1.0.st.v2 exon array analysis

updated 6.1 years ago by James W. MacDonald 67k • written 6.1 years ago by GENOMIC_region • 0

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1.1k

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exons exon array analysis

updated 6.1 years ago by James W. MacDonald 67k • written 6.1 years ago by GENOMIC_region • 0

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1.6k

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differential exon usage exon array analysis annotation hta2.0 diffsplice

updated 7.3 years ago by James W. MacDonald 67k • written 7.3 years ago by relathman ▴ 20

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1.8k

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onechannelgui exon array analysis R

9.2 years ago anna.dolnik • 0

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3.4k

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oligo exon array analysis

updated 9.6 years ago by Marc Carlson ★ 7.2k • written 9.6 years ago by Elena Serrano ▴ 30

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1.4k

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exomecopy exon array analysis CODEX

9.6 years ago kaushal Raj Chaudhary ▴ 10

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3.7k

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affymetrixchip GenechipHumanTranscriptomeArray2.0 exon array analysis

9.8 years ago svlachavas ▴ 840

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5.7k

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exonmap exon array analysis bioconductor

9.8 years ago svlachavas ▴ 840

8 results • Page 1 of 1

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Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by yinhjk602 • 0

https://sprunkiphase4.net/ Sprunki Phase 4 is the latest update in the music rhythm game, offering new beats, characters, and challenges. Y…

Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40

Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …

Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k

limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k

Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…

Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60

Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…

Votes

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

A: Expected counts from RSEM in DESeq2

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