Bioconductor Distancetonearest

Showing : distancetonearest • reset

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1.1k

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rtracklayer ranges distanceToNearest

15 months ago robjohn70000 • 0

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996

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GenomicRanges GenomicFeatures grange distanceToNearest R

5.5 years ago rmash ▴ 20

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1.4k

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GenomicRanges distancetonearest strandedness

updated 7.0 years ago by Valerie Obenchain ★ 6.8k • written 7.0 years ago by shraddha.pai • 0

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1.5k

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GRanges distancetonearest

updated 7.4 years ago by Julie Zhu ★ 4.3k • written 7.4 years ago by chitsazanalex ▴ 10

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5.2k

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chipenrich granges distancetonearest function dataframe

7.5 years ago rbronste ▴ 60

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2.5k

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genomicranges DistanceToNearest

updated 8.6 years ago by Valerie Obenchain ★ 6.8k • written 8.7 years ago by roladali ▴ 20

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Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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